KEGG   Gasterosteus aculeatus (three-spined stickleback): 120828673
Entry
120828673         CDS       T07457                                 
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:gat00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:gat03037]
    120828673
Cilium and associated proteins [BR:gat03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   120828673
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122_C Beta-prop_EML_2 WD40_WDHD1_1st Zn_ribbon_IFT122 WD40 WD40_Prp19 WD40_CDC20-Fz EIF3I WDR55 ANAPC4_WD40 TPR_IFT80_172 TPR_IF140-IFT172 Beta-prop_TEP1_2nd Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st Beta-prop_EML Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_2nd TPR_GEMI5 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st TPR_7 Beta-prop_Vps41 eIF2A TPR_COPA_B Beta-prop_SPT8 Beta-prop_WDR75_1st TPR_2 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 120828673
NCBI-ProteinID: XP_040048107
LinkDB
Position
XII:complement(2061281..2078522)
AA seq 1186 aa
MRAVLAWKETIRDQCIYDLAFKPDGSQLIIAAGLRVLVYDVADGTIIQPLKGHKDTVYCV
AYAKDGKRFASGSADKSIIIWTSKLEGILRYTHNDSIQCVAYNPVTHQLASCSSGDFGLW
SPEQKSVNKHKVSSKITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIERPGGSSSPI
WSIVWNPSKDEHNDILAVADWGQKLSFYQLSGKQIGKDKTLTYDPCCVSYFSKGEYIVLG
GSDKQASLYTKDGVRLATIGEQSTWVWTCRVKPDSNFVVLGCQDGTIACYQLIFSTVHGL
YKDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYRNRLAIQLPERIVIYELYSDD
SSDMHYRIKERICRKFECNLLVACSQHIILCQEKRLQSLSFTSVKEKEWVMESLIRYIKV
IGGSPGREGLLVGLKNGAILKIFVDNPFPITLLKLSTSVRCLDMSASRSKLAVVDEHNTL
LVYDIVSKELLFQEPNANSVAWNTQCEDMLCFSGNGYLNIKASNFPVHQQKMQGFMVGYN
GSKIFCLHVYAMLSVEVPQSAPMYQYLERKMYKEAYQIACLGVTDSDWRDLATDALEGLD
FDTAKKAFIRIRDLRYLELINSIEERKKRGESDNELFLADVYAYQGKFHEAAQLYKRSGH
QHRALSMYTDLRQFEYAKDFVGATDPKSSRILMTKQADWARSSKEPRAAAEMYLSAGEHL
KAIDLIGEHGWEDMLIDIARKLDKAERELLAKCALHFKRLKHHGYASETYSKMGDLQALV
QLHVETCHWEEAFSLVEKHPQFKNHVFVPYAQWLAEHDRFEEAQKAFHKAGRQNEAVKVL
EQLTHNAVVENRFNDAGYYYWMLSMQCMDIARAESEDQRDEMLKKFERFQHLAELYHVYR
SIQRYTDEPFSSHMPETLFNICRFLLNNLAKDVPPGISKVNTLYALAKQSRRLGAYKLAR
YSYEKLQELHVPSRFQDSVELGSLNIRSKPFHDSEDLIEGMMCYRCSTNNPLLNSQGSVC
INCRQPFIYSASSYEVLPLVQFYLEEGVGDEEAVSLIDLEVPPADRRDARWQDVDHGELQ
TLRMNEGLDDAEEDPFTAKMSFEQGGSTFVPVKVGRPALRSMSRRDVLIKRWPRPLNWEY
FRSLLPDVSITMCPTCFKMFHSEDYELLVLQHNCCPYCRRPIDEQN
NT seq 3561 nt   +upstreamnt  +downstreamnt
atgagagccgttctagcgtggaaagaaaccattcgggaccaatgcatttatgatcttgca
ttcaagccggatggcagccaactcatcatcgccgcagggcttcgtgtcctcgtttatgac
gtagccgatggaacgattatccagcctttaaaaggacacaaagacaccgtgtactgtgtg
gcctacgctaaagatggtaaaaggtttgcctcggggtctgctgacaaaagcatcatcatc
tggacttctaaactggagggtattttgagatacactcacaatgactccatccagtgtgtt
gcctacaaccctgtcactcaccaactagcctcctgttcttctggggactttggtctttgg
tcaccggagcaaaaatccgtgaacaaacacaaagtgagcagcaaaataacatgttgtggg
tggacaaacgacggccagtacctcgccctcggcatgatgaacggcgtggtgagcattcgg
aacaagaacggagaggagaaggtcaagatcgagcgtccaggaggctcctcgtcccccatc
tggtccatagtctggaacccctcaaaggacgagcacaatgacatcctggctgtggcagac
tggggtcagaagctgtccttctaccagctcagcggaaagcagatcggcaaagacaagact
ctcacctacgacccttgttgcgtcagctacttctccaagggcgagtacatcgtcctgggg
ggctccgacaaacaggcgtccctctacaccaaagacggcgtgcggctcgccaccatcggg
gagcagagcacctgggtgtggacgtgccgggttaagcccgactccaactttgtggtgttg
ggctgccaggatgggaccatcgcctgctaccaacttatcttcagcacagttcacggcctc
tataaggaccgctacgcgtacagagacagcatgactgatgtcatcgtccagcacctcatc
accgaacaaaaagtacgcataaagtgccgcgagctggtgaagaagatcgccatctacaga
aaccgcctggccatccagctgcccgagaggatcgtcatctacgagctctactcggacgac
tcctcggacatgcactaccggatcaaggagaggatctgcaggaagtttgaatgcaacctg
ctggtggcctgttcccagcatatcatcctgtgtcaggagaagcgcctgcagtccctgtcc
tttaccagcgtcaaggagaaggaatgggtgatggagtctctaattcgatacatcaaagtg
atcgggggttcgccaggcagagagggcctattagtgggcctaaagaacggtgctatcctg
aagatattcgtcgacaacccgttccccatcacgctgctgaagctgtccacctccgtgcgc
tgcctggacatgagcgcctcccgcagcaagctggctgtggtggacgagcacaacacgctg
ctggtctacgacatcgtcagcaaggagctgctctttcaggagcctaatgctaacagcgtg
gcctggaacacccagtgtgaggacatgctgtgcttctctggcaacggctacctcaacatc
aaggccagcaacttccccgtccaccagcagaagatgcagggcttcatggtcggctacaac
ggctccaagatcttctgcctccacgtctacgcaatgttatccgtggaggtgcctcagtcg
gcccccatgtaccagtacctggagaggaagatgtataaggaggcctaccagatcgcctgt
ctgggcgtgaccgacagtgactggagggatttagccaccgatgccctggagggactcgac
ttcgacaccgccaagaaggccttcattagaatcagagacctgcgctacctggagctcatc
aacagcatcgaggagaggaagaagcggggcgagagcgacaacgagctgttcctggcagac
gtctacgcctaccaggggaaattccacgaggcagcgcagctctacaagcgcagcggccac
cagcaccgagctctgagcatgtacactgacctgcggcagtttgagtacgcaaaggatttc
gttggagcgacagacccgaagagctctcgcatcctgatgaccaagcaggccgactgggcg
aggagcagcaaggagccgcgggcggcggcggagatgtacctgtcagcgggggaacatctc
aaagccatcgacctcatcggggaacacggctgggaagacatgctgatcgacatcgcgcga
aagctggacaaggcggagcgggaactgctggccaagtgtgcgctccacttcaagcggctg
aagcaccacggctacgcctcggagacctactccaagatgggagacctgcaggccctcgtg
cagctgcacgtggaaacctgccactgggaagaggccttctcgctggtggagaagcacccc
cagttcaaaaaccacgtcttcgtgccgtacgcccagtggctggcggagcacgaccgcttt
gaggaggcgcagaaagcattccacaaggccgggcgacagaacgaggccgttaaagtcctg
gagcagcttacccacaatgcagtggtggagaaccggttcaacgatgcaggctactattac
tggatgctgtccatgcagtgtatggacatcgccagagcagaaagcgaagaccagagggac
gaaatgctgaagaagtttgagcgctttcagcatctggctgagctctaccacgtctatcgc
tccatccagcgctacacggacgagcccttcagctcccacatgcctgagacgctcttcaac
atctgcaggttcctcctgaacaacctggccaaggacgttccgccgggcatctctaaagtc
aacacgttgtacgcgttggccaagcagagccgcagactgggcgcgtataaactcgccagg
tattcctacgagaagctgcaggagctgcacgttccgtctcgcttccaggactcggtcgag
ctgggcagcctgaacatccgctccaagccgtttcacgacagcgaggacctgatcgagggc
atgatgtgctaccgctgctccaccaacaaccccctgctgaacagccaggggagcgtgtgc
atcaactgccggcagcctttcatctactcggcctcctcgtacgaggtgctgcccctggtg
cagttctacctggaggagggcgtgggggacgaggaggccgtgtctctgatcgacctggag
gtcccgcccgcggatcggagggacgcgcgctggcaggacgtggaccacggcgagctgcag
acgttgaggatgaacgagggcttggacgacgctgaggaagacccctttactgccaaaatg
agctttgagcaggggggctcgacctttgtccccgtcaaggtgggtcgcccggcgctgcgc
tccatgagcaggagggacgtcctgatcaaacgctggcccaggccactcaactgggaatac
ttccgctccctgctgcccgacgtgagcatcaccatgtgccccacctgcttcaagatgttc
cacagtgaggattacgagctcctggtgcttcagcacaactgctgtccgtactgccgcaga
cccatcgatgagcaaaactga

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