Gasterosteus aculeatus (three-spined stickleback): 120829668
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Entry
120829668 CDS
T07457
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gat04812
]
120829668
Cytoskeleton proteins [BR:
gat04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
120829668
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_EZ
Arm_2
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
120829668
NCBI-ProteinID:
XP_040049910
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Position
XII:8789720..8801200
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AA seq
714 aa
AA seq
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MMAPDPLRSAMRNRGFDDTSLALPSDGKLHTGAQRVLDQVHTIRRSKSKPGSKDSASPIS
PTPNNWTSYESGAFKFSPSKANGTFSRTNSAVSTGHSKTVNSQSRSVFARTWGGRHVTNS
GIWDPQVSAHNCPTASNGLKSARSDPVLAPSFSAAPVMRAKGQGVQSQNNLQTRQNRLST
YSRTSFPISTSQNAIFQTPSAQVHTDGKMGTIKHSKIAQESSKMNSVVNMSEMTLDQAVE
FLSYTEEYQQCGATFIQHKTFKDDSTKQEVFHLGGIPGLVSLMRSPAPGVSQAAAGALRN
LVFKDQKNKLEVQNCGGIAKALQLLKETDSTETQKQITGLLWNLSSADELKEELIATALP
ALTENVVVPFTCWSDSCANNNIHPDVFHSATGCLRNLSCSQKKERQAMRQCRGLIDSLMN
YVQSCVAEENPDDKSVENCACILHNLTYQLEEESPVCFDKFRPSPQSQAGGRKSPTMGCF
SPKSSKAQKEIFNGVLEMPEVSSPSGVEGLCHPKSMQTYLSLLGSSQKDATLEACCGALQ
NLTANKGIGSSAMSQILVQKMGALVQIPRLLKSPNRSLQKAAISLLGNMSRTSSVQPTMA
KQILPELTDLLSSGPREMGNLDDTMMTACNTVRSLMLADTEVSKKVINNKLVTSLADLSE
NGSFPKSSKAASHLLYSLWNEKSLQGAVKKLGMAKSLFVNDITTAVQRSMQVIE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgatggctccggacccgctgcgttctgccatgagaaaccggggatttgacgacacgtcg
ctcgccttgccctccgacggcaagctgcacacaggagcgcagcgcgtgctggatcaggtg
cacaccatcaggaggagcaagtccaaacccggcagcaaagactccgcgtccccaataagc
ccgactcccaacaactggacctcatacgagtccggagcattcaagttttccccgtccaaa
gcaaatggcaccttcagccgcaccaactccgctgtgtcaacaggccacagcaaaacggta
aattctcagagtcgcagtgtgttcgctagaacctggggaggaagacatgtcaccaactct
ggcatatgggatccacaagtcagcgcccacaactgtccgacagcttccaatgggttgaaa
tccgctcgcagtgaccctgttttggcgccttcattttctgctgcacccgtcatgcgagcc
aaaggccagggggtccaaagccagaacaacttgcagactcgacagaacagactcagcacc
tattctaggaccagctttccgatttccaccagccagaatgcgatcttccagacaccctct
gcccaggttcacaccgacggcaagatgggcaccatcaaacactccaagatagcgcaggaa
tcctccaagatgaacagtgttgtgaacatgtcagaaatgacactggatcaggctgtagag
ttcctgtcttacactgaagagtaccagcagtgtggagccaccttcatccaacacaaaacc
ttcaaagacgacagcaccaaacaggaggttttccatttgggaggtatccctgggcttgtg
agcctgatgcggagccccgcccctggggtgagccaggccgcggctggagctctgaggaac
ctggtgttcaaagaccagaaaaacaagctggaggttcagaactgtggcggcatagcgaag
gccctgcagctactaaaggagacggattctaccgagacccagaaacaaattactggcctg
ctatggaacctgtcctctgccgacgagctgaaggaagaactcatagctacagctttgcct
gccctgactgagaacgtggtggtgccgttcacctgctggtcagacagctgtgccaacaac
aacatacaccccgatgtcttccacagcgccacagggtgcctgcggaacctgagctgctcc
caaaagaaggagcggcaggcaatgagacagtgccgcggcctcatcgactccctcatgaac
tacgtccagtcctgtgtggcggaggaaaaccctgatgacaagtctgtggagaactgtgcg
tgcatcctccataacttgacctaccaactggaggaagagtcccctgtctgcttcgacaag
ttccgaccttcaccacagagccaggctggggggaggaaaagccccaccatgggatgcttc
agccccaagagcagcaaggctcagaaagagatattcaacggtgttctggaaatgccggag
gtcagctccccatcaggtgtggaggggttgtgccatcccaaatccatgcagacctacttg
tctttactgggctcgtcccagaaagatgccaccctggaagcgtgctgtggtgccctgcag
aacctcactgccaacaagggaattgggtccagtgccatgagtcagattctggttcaaaag
atgggggctctggtgcagataccccgtcttctaaagtcccccaaccgcagcttgcaaaag
gccgccatatccctgctgggtaacatgtctcggaccagcagtgtgcagcccaccatggca
aagcagatcctgcctgagctcaccgacctcctctcctccggcccacgagaaatgggaaac
ttggacgacactatgatgaccgcttgcaacacagtcaggagtctaatgttggcggacact
gaggtcagcaagaaggttatcaataataaactggtgacgtcccttgctgacctcagcgag
aacgggtcttttcccaaatcgagcaaagcagcttcccacctgctctacagcttatggaac
gagaagagtcttcaaggcgctgtgaaaaagctggggatggctaaatcactttttgtgaac
gacatcactacagctgtgcagaggtcaatgcaagttattgagtga
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