Gasterosteus aculeatus (three-spined stickleback): 120832813
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Entry
120832813 CDS
T07457
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04620
Toll-like receptor signaling pathway
gat04621
NOD-like receptor signaling pathway
gat04622
RIG-I-like receptor signaling pathway
gat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120832813 (traf3)
04621 NOD-like receptor signaling pathway
120832813 (traf3)
04622 RIG-I-like receptor signaling pathway
120832813 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120832813 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
Sina_ZnF
zf-C3HC4_2
DUF4201
zf-C3HC4_4
ATG16
TolA_bind_tri
Baculo_PEP_C
Crescentin
FapA
MctB
DASH_Dad2
GAS
EzrA
Fez1
Snapin_Pallidin
Synaptobrevin
DUF1664
DUF724
Fzo_mitofusin
zf-TRAF_2
Motif
Other DBs
NCBI-GeneID:
120832813
NCBI-ProteinID:
XP_040055363
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All DBs
Position
XV:79879..86815
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AA seq
590 aa
AA seq
DB search
MSAGRSADGREVQIPLQQVAPSLTPALSVASPVHRQVNPWPPSDTTPQSVPAGFLPLHKG
FRDHFALTPEAKYCCETCSLVLCQPRQTECGHRFCQSCINDILSHPNPVCPADMEPLFKD
KIFRDVCCHREIMALKVYCRSEANGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCKERMMR
KEIPDHLSWKCKHRETSCEFCMTKMPLTDLQKHKETVCPAFPVSCPNHCSVSSLPRSELS
SHQNDCPKAQVCCQFQRYGCTFQGLNQDMRQHESTSAGEHLRMIANKNSVLENKVEDIKG
ELLERYKVLPALSSRLSELENQSDELREKNRQVEQKLATMQKLMSSHSEKLLEVELELRS
LRVLRDEVENLRGTLENVRTRLNTLEQGGRSGTGSTTHTLATLENQLKRHDEMLSVHEIR
LADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVGAKTLSLYSQPFYTGYFGYKMCARV
YLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQGPLRKHLGDAFKPDPNS
SSFRRPAAEMNIASGCPLFVSQSVLETGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcggggcggagtgctgacgggagggaggtgcagattcccctccagcaggtggcg
ccctccctgaccccggccctctcagtggcttcgcccgttcaccgccaagtcaacccctgg
ccccccagcgacaccacgcctcaaagtgtccctgcagggttcttacctctgcacaaagga
ttcagagaccactttgcattgactccagaagctaaatactgctgtgagacctgcagcctg
gtcctctgtcagccccgccagacggaatgtggacaccgcttctgtcagagctgcatcaac
gacattctcagtcatcctaacccggtgtgtccagctgacatggagcctctcttcaaagac
aagatcttcagagacgtctgctgccatcgtgagatcatggctctgaaagtttattgtcgc
agtgaagccaacggctgtcaggagcagatgagtctgcagcagatacctgaccacctgaat
gtgtgtcctttcttcgaggtaccttgtcctttgggtaaatgtaaggagcgaatgatgagg
aaagagattcccgaccatctgagctggaaatgtaaacacagagagaccagctgcgagttc
tgtatgacaaagatgcctttgactgacctgcagaaacacaaggagacggtgtgtccagct
ttccctgtgtcgtgtccaaaccactgctccgtctcgtccctcccccggagtgagctgtcc
agccaccagaacgactgtcccaaagctcaggtgtgctgtcaattccagcgctatggctgc
accttccagggtctgaaccaggatatgaggcaacatgagtccacctcggcaggcgaacac
ctacgaatgatagccaacaaaaactctgtgttagagaacaaggtggaggacattaaaggg
gagctactagagaggtacaaggtgcttcctgctctcagcagtcgactttctgaactggag
aaccagagcgacgagctgagggagaagaaccgacaggtggaacagaagctggccactatg
cagaaactaatgagctctcactctgagaagctcctggaggtggaactggagcttcgatct
ctccgtgtcctcagagatgaggtggaaaacttgaggggaacgcttgagaatgtccggaca
agactgaacactctggaacaaggggggcgcagcgggactggatccacaacacacactctg
gcaaccctggagaatcagctaaagcgacatgatgaaatgctgagtgtccatgagatccga
ctagccgacatggacctgcgtttccaggtgctggagacggcgagttacaacggaaccctg
atctggaagatccgtgactacaagagaaggaaacaagaagctgtgggggcaaagacactc
tcgctctactcgcagccattttacaccggttactttggatacaagatgtgcgcccgcgtc
tacctgaacggagacggcatgggcaaggggacacacctgtccctgttctttgtggtgatg
agaggcgagtacgacgccctgctgccctggcccttcaaacagaaggtgactctaatgctc
atggaccagggcccgttaaggaaacacttgggcgatgccttcaagccggatccaaacagc
agcagcttcaggcgtcctgcagctgagatgaacattgcctccggctgtcctctgtttgtc
tctcagagtgttcttgagactggcacctacatcaaagacgacaccatcttcatcaaggtt
acagtggatacctctgaccttcctgatccgtga
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