Gasterosteus aculeatus (three-spined stickleback): 120833078
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Entry
120833078 CDS
T07457
Symbol
exd2
Name
(RefSeq) exonuclease 3'-5' domain-containing protein 2 isoform X1
KO
K20777
exonuclease 3'-5' domain-containing protein 2 [EC:
3.1.11.1
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gat03400
]
120833078 (exd2)
Enzymes [BR:
gat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
120833078 (exd2)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120833078 (exd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RRXRR
Ribosomal_S14
Cytochrom_c3_2
Motif
Other DBs
NCBI-GeneID:
120833078
NCBI-ProteinID:
XP_040055832
UniProt:
A0AAQ4S932
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All DBs
Position
XV:complement(1906243..1912228)
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AA seq
648 aa
AA seq
DB search
MSHRGTLTAVITTVLGATLGGLLVWRVYRTKRKRLPPVQEAGDLLRAPCPVEKDSAAEEH
QTDQPTHPLPEEEFQAAECPTTQQQQPPPPPPPPAPVPSSEELLAVTPVTVSSEEEWQRL
WPLMQKELSVFPVLGLDCEWVKATGVSVKGRASAVSLLQMATYSGLCVLVRLLAFRSAQQ
PFPLSLMEVLRDPHVLKVGVGCYEDGKRLTRDYGLSLTCTVDLRYLALRQRQAVVNNGLS
LKSLAEDLLNVSLDKSLELRCSDWEADQLTLKQMNYAARDAQVSIALFLHLLGLDAPGGG
GGSGGSYSELAARCQGLVDAPFRSRGDGEDRPPDGERRRRTRKPAAFESPESGDQQVPDP
RKHKRKPLGVGYSARKSPLYDNCFLHAPDGQPLCTCDKKKAKWYLDKGIGVLQSEDPFVV
RLLFEPSGRPDSQQDYYLTAKENLCVVCGKADSYIRKNIVPHEYRRHFPTEMKDHNSHDI
LLLCTSCHAASNVHDGFLKQRLAEEFAAPQGCEEGVRPLEDSDRRRVRSAARALLTAGEA
LPELRRDELQALIRSFLGEERELTEASLQQAAALETRIFNEAYVPHGLKVVRTCAEQGLR
GLMDLERRWRQHFLTAMRPRHLPPLWSPDHNHSKFLRKYGEDLPIKLN
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatcgaggaactttaaccgctgtcataacgacggtgctgggagcgaccttaggc
gggctgctggtctggcgagtttaccgaacgaagcggaagaggctgcctcccgtccaggag
gcgggcgatcttctgcgggcgccgtgtcctgtggaaaaggactccgcggctgaggagcat
caaaccgaccaaccaacacatcctcttccggaggaggagttccaggctgcagagtgtccg
accacgcagcagcagcagccgccgccgccgccgccgcctcctgcgccggtgccgtcttct
gaggagctgctcgctgtgacaccggtgactgtgagctctgaggaggaatggcagcggctg
tggccgctgatgcagaaggagctgtcggtcttccctgtgctggggctcgactgcgaatgg
gtaaaggccaccggcgtgtccgtgaaaggccgagcctccgccgtctccttgctgcagatg
gccacgtactcgggtctgtgcgtcctggtgaggctgctggcgtttcgcagcgcccagcag
ccgttccccctcagcctgatggaggtcctgcgagacccgcacgtcctgaaggtcggcgtc
ggctgttatgaagacggcaagcgcctgacgcgagactacggcctgtcgctgacctgcacg
gtggacttgcgctaccttgccttgagacaaaggcaagctgtagtgaacaacggcctcagt
ctgaagtctctggctgaagatctgctcaacgtgtcactggataaatccctggagctgcgc
tgcagcgactgggaggcggatcagctgacgctgaagcagatgaattacgctgccagagac
gcccaggtctccatcgcgctcttcctccacctcctcggcctcgacgcgcccggcggcggc
ggcggcagcggcggctcttactccgagttggccgcccgctgccagggcctggtggacgct
cccttcaggagccgaggggacggcgaggacaggccgcccgacggggagaggcgacgcagg
accaggaagccggcagcttttgaaagcccggagtctggagatcaacaagtcccagaccct
cgaaagcacaagaggaaaccgctgggagtgggctattcggccaggaagtctcctctctac
gataactgcttcctgcacgctcccgacggccagccgctgtgcacctgcgacaagaagaaa
gccaaatggtacctagataaaggaataggagtgctccagagcgaagaccccttcgtggtg
aggctgctgtttgagccgtcgggacgtcccgactcccagcaggactactatctcacggcc
aaggagaacctgtgcgtggtctgtggcaaagcggattcctacatcaggaagaacatcgtg
ccccacgagtaccgacggcactttcccaccgagatgaaggaccacaactcccacgacatc
ctgctgctctgcaccagctgccacgccgcctccaacgtgcacgacggcttcctgaagcag
cgcctggccgaggagttcgccgccccgcagggctgcgaggagggggtccgcccgctggag
gactctgaccgccggcgggtgcgctcggcggcgcgcgctctgctcaccgccggggaggcg
ctgccggagctgcggcgggacgagctgcaggctctgatcaggagcttcctgggggaggag
cgggagctgacggaggcgtcgctgcagcaggccgccgctctggagacgaggatcttcaac
gaggcgtacgtgcctcacggcctgaaggtggtgcggacctgcgccgagcagggcctgcgg
ggcctgatggacctggagcgccgctggaggcagcacttcctcaccgccatgcggccccga
cacctcccccccctctggtccccggaccacaaccacagcaagttcctccgcaagtacgga
gaggacctgccaatcaagctcaactga
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