Gasterosteus aculeatus (three-spined stickleback): 120833230
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Entry
120833230 CDS
T07457
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120833230 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120833230 (c9orf72)
Membrane trafficking [BR:
gat04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
120833230 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
DUF7645
Motif
Other DBs
NCBI-GeneID:
120833230
NCBI-ProteinID:
XP_040056080
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All DBs
Position
XV:2060698..2070105
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AA seq
462 aa
AA seq
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MSSGCPPQSPAVAKSEVPVEGECPLLAATFAYWDNILGPRVRHIWTPKGDQLMFLSDGEV
TFLANHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQT
ELPFYLPLHTVCVERLKHVIRKGRISMQKGYNIISVLSLEIVPIMELLASMKSHSVPEDI
NIKDTVLNDDDIGDSCHEDFLHKAVSSHLQTCGCSIVVGSNPEKVNKIVRTLCLFLTPAE
RKCSRLCRTDSSFKYDTGLFVQGLLKDSTGSFVMPYRQVLYSPYPSTHIDVDINTVQQMP
PCHEHTYNQRRYMRSELSARWKADSEEDVAPDTVIHTDESFTPDLNIFQDVMHKDTLVKS
FIDEVFMLKPRLSLRSTYLAQFLLLLHRKSLTLLKYIEDETQKGKKPFRSLRNLKTDLDL
TVEGDLYIVMAFAEKLRAGLHSFVFGKPFYTSMQERDALMSF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccggctgtccgccccagtcgcctgcagtggcaaagtctgaggtaccggtagag
ggagaatgcccgctgctggccgccaccttcgcctactgggacaacatcctgggcccccgc
gtgcgccacatctggacgccgaagggggaccagctgatgttcctcagcgacggagaggtc
accttcttggccaaccacacgctcaacggggagatcctgcgcagcgccgagtgcggcgcc
gtggacgtgaagttcttcgtcctggcggaaaagggcgtcatcatcgtgtcgctcatcttc
gacggcgagctgaagggagacaagaacacgtgcgccttgtccattatcctcccgcagaca
gagctgcccttctacctgcccctgcacaccgtctgcgtggagaggctgaagcatgttatc
cgcaaagggcgcatttccatgcagaagggctacaacatcatctcggtgctgagcctggag
atcgtccccataatggagctgttggcctcgatgaagtcgcacagcgtgcccgaagacata
aacataaaagacacggtgctaaatgatgatgacatcggggacagctgccacgaggacttc
ctccacaaggccgtcagctctcatctgcagacttgtggctgttccatcgtggtgggaagc
aacccggagaaagtaaataagattgtgcggaccctgtgcctcttcctcaccccggctgag
aggaagtgctcccgcctctgcaggaccgactcttctttcaaatatgacacgggcctgttt
gttcagggtctgctcaaggactccacaggcagcttcgtgatgccctaccgccaggtgctc
tactccccgtacccgagcacgcacatcgacgtcgacatcaacacggtccagcagatgccg
ccgtgccacgagcacacgtacaaccagcggcgctacatgcggtccgagctgagcgcccgc
tggaaggcggacagcgaggaggacgtggcccccgacacggtcatccacaccgacgagagc
ttcacccccgacctgaatatatttcaagacgtcatgcataaagacactttggtgaagtct
ttcatagatgaggtgttcatgctgaagcccagactgtccctgcggagcacctacctggcc
cagttcctgctgctgctccacaggaagtccctcacgctgctcaagtacatcgaggacgag
acgcagaaggggaagaagcccttccgatcgctgcgcaacctgaagacggacctggacctg
acggtggaaggcgacctgtacatcgtcatggccttcgccgagaagctgcgggcggggctt
cactccttcgtgttcgggaagccgttctacaccagcatgcaggagcgggacgcgctcatg
agcttctga
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