KEGG   Gasterosteus aculeatus (three-spined stickleback): 120834389
Entry
120834389         CDS       T07457                                 
Symbol
kdm6a
Name
(RefSeq) lysine-specific demethylase 6A isoform X1
  KO
K11447  lysine-specific demethylase 6A [EC:1.14.11.68]
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:gat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gat03036]
    120834389 (kdm6a)
Enzymes [BR:gat01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     120834389 (kdm6a)
Chromosome and associated proteins [BR:gat03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    MLL3/MLL4 complex
     120834389 (kdm6a)
   Histone demethylases
    120834389 (kdm6a)
SSDB
Motif
Pfam: TPR_1 KDM6_C-hel JmjC KDM6_GATAL TPR_2 TPR_8 TPR_17 TPR_16 TPR_12 TPR_19 TPR_9 TPR_CcmH_CycH TPR_11 TPR_7 ARM_TT21_C RPN7 ANAPC3
Other DBs
NCBI-GeneID: 120834389
NCBI-ProteinID: XP_040058285
LinkDB
Position
XVI:16231140..16258823
AA seq 1448 aa
MKSCGVSLAAAASAAARSLGVAGNDEEKMASGTATDIEEDFPKLTAQERERLDGTDSSLF
GFHRLQEDGARTKALLLKAVSCYDALILKAEGKVDPDIFCQLGHFNLLLEDYSKALSAYQ
RYFTLQPDYWKNAAFLYGLGMVYFHHNAFQWAIKAFQEVLYIDPGFSRSKEIHLRLGLMF
KVNTDYESSLKHFQLALIDSDLCTLSKAEIQFHIAHLYEIQKKHTAAKEAYENLLQTENL
PAQVKATTLQQLGWMHHTVEQLGDKATKDSYAIQCLQKSLEADPNSGQSWYFLGRCYSSI
GKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHSHAAAWMD
LGTLYESCGQPHDAIKCYINATRSKACLNTAALTQRIKLLQAQLCNLQPGSLQNKSKMLP
SIEEAWSLPIPAELTSRQGALSTAQAQQACKGDGGQSNHTDPQASPAKRKRTASPAKGVA
DSWANGPNQEQTPSWYLTPQKLQLLDHLRTNRATLKPPQVQMLEQLENQFSAMQQHQQQM
KQQAAASGPPRPGLPNGPSAESPHHQGGLPRTSPLNHAASRPPCVAQPTANGSCSSSPSA
AHPDKTPPLGPGGGGASNGNVPYPQQNSLPHNCTAASTSSTTSSPSNADESWRSQQRNTT
TQGLHKGPGSHSAGPNGEPLFSSSPSPHTSFSSSGILNQVGHSSGPCTASSSASSLSPTS
PQTTPNHLSSPPHAATTSGVHTKDATPSGGKSCSNGAAATLPSGSEAAVRHSAGTPQSPS
TTPAQGSTNHVQPRVTDRSASLSQPASPGVLASDNPQLSALLKGKANATSNDGNSNHGGP
SSEKVNNVHPGLHGAARPASEQQQQSLLSAAAPSPRSADPHTTKSLSCLNSPSSSNSQGP
TVNGKGPEDSRSPERVEPPGGAQRRSVPAALAPWSSVSIYPSSSEVLKACRNLGKNGLST
SSILLDKCPPPRPPRPPSPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPSNPVTVI
RGLAGALKLDLGLFSTKTLVEANPDHLVEVRTQLAQPTDENWDPSGSRKMWRCESSRSHT
TVIKYAQYQASSFQESLREENEKKKETETEAGSSDSAMRRRKGSFKHIKFGTNIDLSDEK
KWKQQLQELSKLPAFARVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCS
VNINIGPGDCEWFAVPESYWGVITDFCEKNNINFLMGSWWPNLEDLYETNVPVYRFIQRP
GDLVWLNTGTIHWVQAIGWCNNIAWNVGPLTAHQYKQAVERYEWNKLQSVKSIVPMIHLS
WNMARNIKVSDHRLFEMIKYCLLRTLKQCQMQRDLLLAAGKELAWHGRTQSEPAHYCSIC
EVEVFDLLFVTTESNTKKTYVVHCQDCARRGSANLDNFVVLEQYKIEDLMQVYDQFTLAS
PLPSSSRC
NT seq 4347 nt   +upstreamnt  +downstreamnt
atgaaatcgtgcggagtgtcgctcgccgccgccgcatctgccgctgcccggagcctcggc
gttgctggtaatgacgaggagaaaatggcgtcgggaacagcgaccgatatcgaagaggac
tttccgaagctaacggcgcaagaaagagagcgcttggacggaaccgacagttcactgttt
ggatttcataggcttcaagaagatggcgccagaacgaaggccttgctgttaaaggccgtc
agctgctatgacgccctcatcctgaaagcagaggggaaagtggaccctgacattttctgc
cagctgggccacttcaacctcctgctggaggactactcaaaagcattatcggcataccag
aggtacttcactttacagccggactactggaagaatgctgcctttttatatggccttggc
atggtttacttccatcacaacgcatttcagtgggctatcaaggcgttccaggaggtgctt
tacatcgaccccggcttctcaagatctaaagagattcacctgagactgggactcatgttt
aaagtcaacacggactacgagtcgagcttaaagcactttcagctggctttgatcgactcc
gacctctgcactttgtccaaagctgaaattcagttccacatcgctcatttgtatgagatc
cagaagaaacacacagcggcaaaagaagcgtatgaaaatctgctgcagacggagaatctt
cctgcacaggtgaaggcgaccacactgcaacaacttggctggatgcatcacacggtggag
cagctgggggataaagccaccaaggacagctatgccatccagtgtctgcagaagtcttta
gaagcggacccaaactccggccagtcctggtactttctcggcaggtgctactccagtatt
gggaaggtgcaggatgccttcatctcctaccggcagtccattgataagtcagaggccagt
gctgacacctggtgctccataggggtgctctaccagcagcagaaccagcctatggatgct
ctgcaggcctacatctgtgctgttcaactagaccacagccacgcggccgcctggatggac
ctcggcaccctctacgaatcctgcggccagccgcacgacgccatcaagtgttacatcaac
gccacgcgcagcaaggcctgcctcaacaccgctgcgctcacacaacgcatcaagctgctg
caggctcagttgtgtaacctacagccaggtagtctgcagaataagagtaaaatgctgcct
agtattgaggaggcatggagcctgcccattcctgctgagctcacgtccaggcagggggcc
ctgagcactgcacaagcacagcaggcctgtaaaggggacgggggccaatccaatcacacg
gacccgcaggccagtcctgccaagaggaagcgcactgccagcccggctaagggtgtggcg
gactcgtgggcgaacgggcccaatcaggagcagacccccagctggtacctaacgccacag
aagcttcagctcctggatcacctgcggacgaatcgagcgaccctcaagcccccccaggtg
cagatgctggagcagctggagaaccagttctctgctatgcagcagcatcagcagcagatg
aagcagcaggcggcggcgagcggcccgccgcggcccggccttcccaacggcccttcggca
gagtcccctcaccaccagggcggcctcccccggacctcccctctcaaccacgcggcctcc
cggcccccgtgcgtcgcccagcccacagccaacgggtcctgttcttcgagtccttcggcg
gcccacccggacaaaaccccccccctgggaccgggaggcggcggcgcgagcaacggaaac
gtgccttacccgcagcagaactctctacctcacaactgcacagccgccagcaccagcagc
actaccagtagtcccagtaatgccgacgagagctggaggagccaacaacgcaacactacc
actcaagggcttcacaaaggtccaggttcacattcggcaggtcccaatggagaacccctt
ttctcttcctccccctcccctcacacctcgttctcttcctccggcatcctgaatcaggtc
ggacattcctccgggccctgcactgcctcctcctcggcctcctctttgtcccccacctct
ccccagaccacgcccaaccacttgtcctcgcccccccacgccgctactacctcaggggtc
cacaccaaagacgccacgccttcagggggcaaaagctgcagcaacggtgccgctgccact
ttgccatcaggttcggaggccgctgtcaggcattccgcagggacgccccaaagtcccagc
accaccccggcgcagggatcgactaatcacgtccagccgcgggtgacggatcgctctgcc
agcctgtctcagcccgcctcccccggcgtgcttgcttcagacaatcctcagctctcagcc
ttgctaaagggaaaagccaacgcgaccagtaacgacggtaacagtaaccacggagggcct
tcctcggagaaggtcaacaacgtccacccgggtctgcacggcgccgccaggccggcgtcg
gagcagcagcagcagtcgctcctgtccgccgctgctccctccccgcgctcagcagaccct
cacaccaccaaaagcctctcctgccttaacagcccatccagctccaacagccaggggccc
acggtcaatgggaaggggcccgaggactcccgcagcccggagagggtggagccccccggg
ggagctcagagacgcagcgtccctgccgccctcgcaccctggtcctctgtttccatctac
ccgagctccagcgaggtgctcaaagcctgccggaacctggggaagaacggcctgtcgacg
agcagcatcctcctggacaagtgtcccccgccgaggcccccccgcccgccctctcctccg
ctgccaaaggacaagctcaaccccccgacgcccagtatttatctagaaaacaagagggac
gccttcttcccgcccctccaccagttctgcaccaacccgtccaacccggtgacagtcatc
agaggcctggccggagcactcaagctcgatctgggcctgttctccaccaagacgttggtg
gaggccaacccggaccacctggtggaggtgcggacccagttggctcagcccacagacgag
aactgggaccccagcggcagcaggaagatgtggcgctgcgagagcagccgctcccacacc
accgtcatcaagtacgcccagtaccaggcctcgtccttccaggagtctctgcgggaggag
aacgagaagaagaaggaaaccgaaacggaagccggttcctctgacagtgcgatgcggcga
aggaagggttcttttaaacacatcaagtttggcaccaacatcgacctctctgatgaaaag
aagtggaaacagcagctccaggagttgtccaaactgccggccttcgcccgcgtggtgtcg
gccggtaacctgctcagccacgtgggacacaccatcctgggcatgaacaccgtccagctc
tacatgaaggtgcccgggagccggacgccaggtcaccaagagaacaacaacttctgttcg
gtgaacatcaacatcggccccggggactgcgagtggtttgcggtgcccgagtcctactgg
ggggtcatcaccgacttctgcgaaaagaacaacatcaacttcctgatgggttcctggtgg
cccaacctggaggacctgtacgagaccaacgtgcccgtgtaccgcttcatccagcgcccc
ggggacctggtgtggctcaacacggggaccatccactgggtccaggccatcggctggtgc
aacaacatcgcgtggaacgttggacccctcacagcacaccagtacaagcaggcggtggag
cggtacgagtggaacaaactgcagagcgtcaaatccatcgttcccatgatccacctctcg
tggaatatggcccggaacatcaaagtgtcggaccacaggctctttgagatgatcaagtat
tgtttgctacggaccctgaagcagtgtcagatgcagcgggatctgctgctggctgctggg
aaggagctggcgtggcacgggaggacccagagcgagccggcgcactactgcagcatctgt
gaggtggaggtgttcgacctgctgtttgtgaccacggagagcaacaccaagaaaacgtac
gtggtgcactgccaggactgcgcccgtagggggagcgctaacctggacaactttgtggtg
ctggagcagtacaagatcgaggacctcatgcaggtttacgaccagttcaccctggcgagt
cccctgccttcctcctctagatgctaa

DBGET integrated database retrieval system