Gasterosteus aculeatus (three-spined stickleback): 120834411
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Entry
120834411 CDS
T07457
Symbol
trpm2
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2 isoform X1
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120834411 (trpm2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120834411 (trpm2)
Enzymes [BR:
gat01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
120834411 (trpm2)
Ion channels [BR:
gat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120834411 (trpm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
LDcluster4
Motif
Other DBs
NCBI-GeneID:
120834411
NCBI-ProteinID:
XP_040058325
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All DBs
Position
XVI:complement(11757560..11790764)
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AA seq
1389 aa
AA seq
DB search
MEEAVIKSKRFPSIRTVRASKNISPSPSFQPSSFTSWIKENIRKRECCFYEKGVREDACK
CGHPKTDHVDEAIKPDNFTGESWNKDRHVREVPTDAFGDISFGGSGQKTGKYARVSTDTS
PEILYKLLTEQWKLSPPNLLISVTGGAKNFYLKPRLKSMFHRGLIKVAQTTGAWIITGGT
HAGVMKHVGRAVRDHALSSSMQGQIVAIGVATWGIIHNRDALVNPEGCFPANYELDIEGQ
GRLSCLDNNHTHFLMVDDGTQGNYGVEIELRSSLEKCISGKLLGNRESGVTIPVVCVVLD
GGPGTLNTIYNAMLNGTPCVILEGSGRIADVIAQVAGLPLFQVTIALIQQLMKKFFGQEY
ENFSDCKIIKWTEKIQYIIQISHLLTVFRISEDNHRDVDVAILQALLKASRASERLGIES
WKGQLELAIAWNRVDLAETEIFTEESQWKSSDLHWAMFSALVGNKPQFVSLLLENGVSLK
DFLKDEETLCDLYRKMPGCIFVRKLDKRVQRLGRKPQARPGRGETTFMTHVSNEVRHLLG
SFTKLLYPPADMSCQFEMLTEDTSVSLSKGSMASQMQLRENNMDAQGNPDRDLFLWAVVQ
NNKELAEVAWELCKDCMSAALAASKILKTMAEEESDADEAEDMRELASHFEDHAIGVFSE
CHDNDEERARKLLVCVSPSWGRTTCLRLALEADDKSFVAQSGVQALLTQIWCGGLSVDNP
VWRVLICMVFFPLIYTGFLAFSDSPDPERQKPLSCRSRLVHLYSSPQVKFYWNVVSSFAF
LFLYAVVVMIDFQATPSAGEMLLYVWLLSLVCEEVRQVLYDPDGFGFHKKAKMYINDLWN
ILDVLSIILFAIGLTFRLTTELFYAGKILLCIDFVVFCLRFMAIFTISSTLGPKIIIVRR
MMTDMFFFMFLLSIWVVAYGVAKQGILIHNDNRLGWIVRGAIYEPYRIIFGDFPTNIDYA
AFDLDSCSMNGTDPLKPKCPVLNENLTPAFPEWLTIIMLCVYLLFANILLLNLLIAIFNF
TFQTVQDNTDRIWKFQRYELIQEYHSRPAAPPPFIIFSHFYLFVRNMFPIKASIISEESK
SKLQMKEEELLSWEALMKDRYLLSTKQKKNQSMEQRILDTFQKVTTIADRLEREEETSSA
AVVQRLAGLEEQACQSAKALQWIMDSLKSQGFAAKEAQPPSQHKTSSLNMDVSFSSYSPA
YYSSEDSGDHVDESESEALDNYRNPRGRTGIRGRGTLSRLGPNRSTELVLTRIQEGHRSV
LEYLEVSDECKGTFTLPGGALQSADYLPVTLDSTIRKTMNEKINAKVSEGTKVCEGYVDD
CRNTDNAWVEITVLNIHLESTSQFAADINSTVESSNGALQWQEVSVKTRLHSHQREFLRL
VAKLHNRRF
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagctgttattaagtccaagcggtttccttcaatcaggacagtcagagcttcg
aagaacatttctccctccccttcttttcagccttcctcctttacgtcctggatcaaggag
aacatccgtaagagggaatgctgcttctacgaaaaaggtgtcagagaggatgcatgcaag
tgtggccacccaaagactgatcatgtggatgaagctatcaagccagacaatttcacaggc
gagtcttggaacaaagacagacacgtgcgtgaagttcccactgatgcttttggagacatc
agctttggtggttcgggacagaagactggcaagtatgcacgagtgtccacagacacaagc
ccggaaatcctgtacaagttactgaccgaacagtggaaactttcccctcccaacctgctg
atctcagtgaccggaggagccaagaacttctatctcaaacctcgtctcaagagcatgttc
cacagaggtctcatcaaagtggcccagacaacaggagcgtggatcatcactgggggtacg
cacgctggtgtgatgaagcatgttgggcgggccgtgagggaccacgcactgagcagctcc
atgcagggccagattgtggctattggagttgcaacgtggggaataattcacaacagggat
gctttagtgaatccagagggttgttttccagccaattacgagctggacatcgagggccag
ggccgactctcttgccttgataacaaccacacccacttcctgatggtggatgatgggacc
caagggaactacggagtggagattgaattgcgtagcagtctggaaaaatgcatctccgga
aagcttctcggaaacagagagagtggcgtcacaatccccgtggtgtgtgtggttttggat
ggaggaccaggcaccctaaataccatttataacgccatgctgaacgggacaccgtgtgtg
atcttggagggctctgggagaatagctgatgtgattgctcaagtggcaggattgccattg
ttccaggtcaccatcgccctcattcagcagttaatgaaaaagttctttggccaagagtat
gaaaacttctcagactgcaagatcataaaatggaccgagaagattcagtacatcatccag
atctctcacttgctgacagtattcagaataagcgaggataatcacagagatgtggatgtg
gctatactccaagccctgctcaaagcttcgagggccagcgagagactgggaatcgagagc
tggaaagggcagctggagctggctatcgcctggaaccgggtggacttagctgagacggag
atcttcactgaggagagccagtggaagtccagcgacctccactgggctatgttctcagcc
ctggtcggcaacaagccccagtttgtcagtctgctgctggagaacggcgtgagcctgaaa
gacttcctgaaagacgaggagactctgtgcgacctctacagaaagatgcccggctgcatc
ttcgtccgcaagctggacaagcgggtccagagactcggccgcaaacctcaagctcgcccg
ggtcgaggtgaaacaaccttcatgactcatgtgtccaatgaggtgcgccacctactgggc
agtttcaccaagctcctctacccacccgccgacatgtcatgtcagttcgaaatgcttaca
gaggacacatctgtatcactgtccaaaggttcaatggcttctcaaatgcaactcagggag
aacaatatggatgcacaggggaaccccgacagagaccttttcctgtgggctgtagtccag
aacaacaaagagctggctgaagttgcctgggagttgtgcaaagactgcatgtccgccgct
ctggccgccagtaagatcctgaagacgatggccgaggaggaaagtgatgcggacgaggcg
gaggacatgcgggagctcgccagtcactttgaggatcacgccattggtgtgttcagcgag
tgccacgacaacgatgaagagcgggcccgtaagctgttggtttgcgtgtctccgtcttgg
gggaggaccacgtgcctgaggttggccctggaggctgacgataaaagctttgtagctcag
tcgggcgttcaggctcttctgacgcagatctggtgcggtgggctttcagtggacaacccc
gtgtggagagtgctgatctgcatggtcttctttccactcatctacaccggctttctggcg
ttcagtgactcccccgacccggagcgccagaagcctctgagctgccggagccggctggtc
catctgtacagctctccgcaggtcaagttttactggaatgttgtgtcttcctttgccttc
ctcttcctgtatgctgtggtggtgatgattgacttccaggctacgccctctgctggggag
atgctgctttacgtctggctgctctcactggtgtgcgaggaggtcaggcaggtgttatat
gatcctgatggctttgggtttcataagaaagccaagatgtacatcaacgacctgtggaat
attttagatgttctgtccatcattctctttgctattggcctcacatttaggctgacaact
gagctgttctacgcgggtaaaatcctcctctgcatcgactttgtggtcttctgcctccgg
ttcatggccatcttcactatcagcagtaccctgggacccaaaatcatcatagtcaggagg
atgatgacggatatgttcttcttcatgttcctgctgagtatctgggtggtggcgtacgga
gtggccaaacagggcatcctcatccacaacgacaaccggctgggctggattgttcgcggg
gcaatatatgagccgtatcgcatcatatttggggattttcccacaaatattgactatgct
gcatttgatttggactcctgcagcatgaatggcaccgatcctctgaagccaaagtgtcct
gtgctgaatgaaaacctaactccagccttccccgagtggctcaccatcatcatgctgtgt
gtctacttgctctttgccaacatactgctgctcaacttgctcatagccatcttcaacttt
acgttccagaccgttcaggacaacacagacagaatttggaagtttcaaagatacgagctg
atccaggagtaccacagccgcccagccgcccctcctcctttcatcatcttcagccatttt
tacctctttgttcgcaacatgtttccaataaaggcctccatcataagtgaggagtctaag
agtaagttacagatgaaggaagaggagctgttgtcctgggaggccctgatgaaggacaga
tacctgctgtccacgaagcagaaaaagaaccagagcatggagcaacgcatcctggacaca
tttcaaaaggttaccaccatagccgatcggctggagagggaagaggagacgagttctgct
gccgtggtgcaaagactggctggactagaggagcaggcctgccagtcagccaaagccctg
cagtggattatggacagtttgaaaagtcagggttttgcagcaaaagaagcacaaccgcca
agtcagcacaaaacttcctcactcaatatggatgttagcttcagctcatacagcccggct
tattattcctctgaagacagtggagaccacgtggatgaatcagagtcagaagccttagat
aattacagaaacccgagaggaaggactggcatcaggggacgagggacactaagccgcctc
ggtccaaatcgaagtacagagcttgtgcttacacgcattcaagaaggccacagatcggtt
ttggagtacttggaggtttcggatgagtgcaagggaaccttcactttacctggaggggcg
ctccagtcagctgactacttgccagtaactcttgatagcaccattaggaaaacgatgaat
gaaaaaataaatgctaaagtttcagagggaaccaaggtgtgtgagggttacgtggacgac
tgcaggaacacggacaacgcctgggtggaaatcaccgtgctaaacattcacctggagagc
acgagccagtttgccgctgacatcaacagcacggtggagagcagcaatggtgctcttcag
tggcaggaggtgagcgttaaaaccagactgcactcccatcaaagagagttcttgcggctg
gttgcgaagctgcacaacaggaggttctga
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