Gasterosteus aculeatus (three-spined stickleback): 120834778
Help
Entry
120834778 CDS
T07457
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04145
Phagosome
gat04514
Cell adhesion molecules
gat04672
Intestinal immune network for IgA production
gat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120834778
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120834778
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120834778
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120834778
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120834778
Exosome [BR:
gat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120834778
Exosomal proteins of epithelial cells
120834778
Exosomal proteins of breast milk
120834778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_2
Ig_3
ig
MHC_II_alpha
Intein_splicing
NAD-bd_HRPKS_sdrA
Motif
Other DBs
NCBI-GeneID:
120834778
NCBI-ProteinID:
XP_040058980
LinkDB
All DBs
Position
XVII:1695683..1698728
Genome browser
AA seq
313 aa
AA seq
DB search
MHSCVCLILFTHNRLCLCHFFLLQPEEHRKGNTPPSEKRAEEKREDDHFLFGSPGTRTPR
ASCIRRPLSSPMAVTLMLALAAALCTSAAGSSHDFHYTYGCYESGEVRVDVLLDGDVVAY
ADFGREEVVFLIPRLPPFLRDLKKLGYEFAKSSFTHCRSVLAKAKRASPNVTIPQDAPVL
SVYSRHEGRGGAANTLFCLADGFYPPSVNFTWTKNGARVTGGVWDLPYGHNRDGTFHRIS
TLSTTPREGDVYSCSVEHRAARRPLASSWEPKEGPSRVSPAAGFFGASLVVCLIGVASGA
YFFTKQPNFGFHS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcactcatgtgtgtgtttgattttgtttacacacaaccgattgtgtctttgccatttc
ttcttgctccaaccggaagaacacagaaagggaaacacacccccgtctgaaaaaagggca
gaagagaaaagagaagatgaccacttcctgtttgggtctcctgggacacggacgcctcga
gcttcctgtatccgtcgtcccctgagctcgccgatggccgtgaccctgatgctcgcgctc
gctgcggcgctttgcacctcggcagcgggctcctcgcatgacttccactacacctacggg
tgctacgagtccggggaggtgcgggtggacgtcctgctggacggggacgtggtggcgtac
gcagacttcggcagggaggaagtcgtgtttctcattcctcggctgcctccctttctgaga
gacctgaagaaactgggctatgagttcgccaaatccagcttcactcactgtcggagcgtt
ttggccaaagccaagagagcttctccgaacgtgaccatcccgcaagacgcgccggtcctc
tccgtctacagccggcacgagggccgaggcggcgctgccaacaccctcttctgcctggcc
gacggcttctacccgccctccgtcaacttcacgtggaccaagaacggggcgagggtcacg
ggcggcgtgtgggacctgccctacggccacaaccgggacgggaccttccacaggatctcc
acgctgagcaccacccctcgggagggcgacgtgtactcctgctcggtggagcaccgggcg
gcccgtcggcccctcgccagcagctgggagccgaaggagggtccgagccgggtgagtccg
gccgccgggttcttcggcgcgagcctcgtcgtgtgcctgatcggcgtcgccagcggagcc
tatttcttcaccaagcagccaaactttgggtttcattcgtaa
DBGET
integrated database retrieval system
