Gordonia alkanivorans: C5O27_12450
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Entry
C5O27_12450 CDS
T05876
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gav
Gordonia alkanivorans
Pathway
gav00300
Lysine biosynthesis
gav00550
Peptidoglycan biosynthesis
gav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C5O27_12450
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C5O27_12450
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gav01011
]
C5O27_12450
Enzymes [BR:
gav01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
C5O27_12450
Peptidoglycan biosynthesis and degradation proteins [BR:
gav01011
]
Precursor biosynthesis
Amino acid ligase
C5O27_12450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AZZ81782
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Position
2741497..2743182
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AA seq
561 aa
AA seq
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MTSRGSSHKGSAGRRKGRKVAGRPREIAPTSVTVLSTATGARLDLVGGADRDTSVQGVTL
RAQDVQPGDLFAALPGAATHGARFADQAVAAGATAILTDPAGRAELSRVLPPETAVAVLI
HPAPRTVLGSVSARVYGNPSQRLKLIGITGTSGKTTTSYLVEAALLAAGHSVGLIGTVET
RVNGVAQPSSLTTPEAPTLQALLASMLEDGVDVVVMEVSSHALSLGRVDGAHVAIGAFTN
LSQDHLDFHQTMRAYFDAKAQLFVPSSPNHAVRAVVCVDDEWGQRMADLARRPGEAAHLQ
PVTVSTGPTPAHWHAGPSDLTGDGTSHTPITEPDGDHVLVMPLPGRYNVANGLLAVAVAH
AAGVPISTALDAVASVSVPGRLQRVDRGQPFLALVDYAHKPGAVEAVLATLRGQLGEGPG
RVAIVVGAGGDRDAGKRPLMGEAAARGAELVIVTDDNPRSEEPAAIRSEVLAGARGVDAA
ERPAGAEPVREVGDRAAAIAEAVAWARPGDIVLVAGKGHEAGQEINGVKNPFDDRDVVAQ
ALESSTPQSASTDSVAAEGDR
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctcgtggttcctcgcacaagggatcggccggcaggcgcaaggggaggaaggtc
gccggtcgtccgcgcgagatcgcgccgacgtccgtgacggtcctgtcgacggccaccggc
gcccggctcgacctcgtcggcggcgccgatcgcgacaccagcgtccagggcgtgaccctg
cgtgcccaggacgttcagcccggcgatctgttcgcggccctgcccggtgcggccacccac
ggtgcgcggttcgccgaccaggcggtcgccgccggggcgaccgcgatcctgaccgatccg
gccggccgcgccgaactcagccgcgtcctgccgcccgagaccgccgtcgcggtcctcatc
caccccgccccgcggaccgtgctgggcagcgtcagtgcccgtgtctacggcaacccttcg
cagcggctgaagctgatcgggatcaccggcacgtcgggcaagaccaccacgtcgtatctc
gtcgaggccgccctgctcgccgccgggcactcggtggggctcatcggaaccgtcgagacc
cgcgtcaacggcgtcgcgcagccgagctcgctgacgacaccggaggccccgaccctgcag
gcgctgctggcgtcgatgctcgaggacggcgtcgacgtcgtcgtcatggaggtgtccagc
cacgcgctgtcgctggggcgcgtcgacggcgcgcacgtcgctatcggtgccttcacgaac
ctctcgcaggaccatctggacttccaccagacgatgcgcgcctacttcgacgccaaagcg
cagctgttcgtgccgtcgtcgccgaaccacgcggtacgcgccgtggtgtgcgtcgacgac
gagtgggggcagcggatggccgatctcgcccgccggcccggcgaggcggcgcacctgcag
ccggtgacggtgtcgaccggtccgacgcccgcacactggcacgcgggaccgtcggatctc
accggcgacggcacctcccacacgccgatcaccgaacccgacggcgaccacgtcctcgtc
atgcctctcccgggccgctacaacgtggccaacggcctgctggcggtcgccgtggcccat
gccgcgggtgtgccgatctccaccgcactcgacgcggtcgcgtcggtgagcgtgccggga
cgtctgcagcgggtcgatcgcggacagccgttcctcgcgctggtcgactacgcccacaaa
cccggtgccgtcgaggccgtgctcgcgaccctgcgcgggcagctcggtgagggacccggc
cgcgtggccatcgtggtcggtgccggcggcgaccgtgatgccggcaagcgtccgctgatg
ggggaggccgccgcacgcggtgccgaactcgtcatcgtcaccgacgacaacccgaggtcg
gaggaaccggccgccatccggtccgaggttctcgccggcgcccgcggcgtcgacgccgcc
gaacgcccggcaggtgccgagccggtgcgcgaggtcggggaccgcgcggccgcgatcgcc
gaggccgtcgcgtgggcacggcccggcgacatcgtgctggtcgcgggcaagggacatgag
gccgggcaggagatcaacggcgtgaagaatccgttcgacgaccgtgacgtcgtcgcacaa
gcgctggagtcgtcgaccccacagagcgcatccaccgattcggtggccgcggagggtgat
cgatga
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