Candidatus Comchoanobacter bicostacola: MMH89_04690
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Entry
MMH89_04690 CDS
T08376
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gbac
Candidatus Comchoanobacter bicostacola
Pathway
gbac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MMH89_04690 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbac03400
]
MMH89_04690 (nth)
Enzymes [BR:
gbac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MMH89_04690 (nth)
DNA repair and recombination proteins [BR:
gbac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MMH89_04690 (nth)
Prokaryotic type
MMH89_04690 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
DUF2400
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UTC24515
LinkDB
All DBs
Position
complement(969028..969669)
Genome browser
AA seq
213 aa
AA seq
DB search
MARLNQDKRNKICARLAERYHDVVIELDYETHYQLLVAVVLSAQATDKGVNKATKSLFTE
VREAQDMVELPFESLVSMIRSIGLYHTKAKNVMALSQILVSEHAGQVPNTMEALIKLPGV
GRKTANVVLNVLFGLPTIAVDTHVFRVSNRLGLSNGKTPDQVEADLVRKTDSEYKQDLHL
WLIHHGRYACKAQRPLCQTCSLIDLCTYKYKNL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgattaaatcaagataaaagaaataaaatttgcgcacggctagctgagcgctat
cacgatgttgtcatagagctagactatgaaactcattaccagctattggttgcagttgtg
ttatctgctcaggctactgataaaggggtaaacaaagcaacaaagtctttgtttaccgag
gttagggaggcacaagatatggtagagcttccctttgaatcgttggtatcaatgattcgt
tcaattgggctgtatcacactaaggctaaaaatgttatggcgttgtctcaaattcttgta
tctgaacatgccggccaagtcccgaatacgatggaggcgcttattaagctaccaggtgta
ggtcgtaaaacggctaatgttgtgctgaatgtcttattcggtttgccaacaattgcagta
gatacacacgtatttcgtgtttcaaaccgactgggtctatctaatgggaaaactccagac
caagtggaggctgatttagttagaaaaacagattcagagtataagcaagatttacatttg
tggcttatacatcatggtcgttatgcgtgtaaagcacaaagacccttgtgccagacatgt
agtcttattgatttatgtacatataaatataaaaacttataa
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