Candidatus Giovannonibacteria bacterium NC_groundwater_467_Ag_B-0.1um_47_26: HYW15_00375
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Entry
HYW15_00375 CDS
T10159
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gbg Candidatus Giovannonibacteria bacterium NC_groundwater_467_Ag_B-0.1um_47_26
Pathway
gbg00300
Lysine biosynthesis
gbg00550
Peptidoglycan biosynthesis
gbg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gbg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HYW15_00375
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HYW15_00375
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gbg01011
]
HYW15_00375
Enzymes [BR:
gbg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HYW15_00375
Peptidoglycan biosynthesis and degradation proteins [BR:
gbg01011
]
Precursor biosynthesis
Amino acid ligase
HYW15_00375
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MoCF_biosynth
MeaB
Motif
Other DBs
NCBI-ProteinID:
QQG42671
UniProt:
A0A7T5REK3
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Position
complement(49987..51234)
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AA seq
415 aa
AA seq
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MEALLNFIKRLIPKQIFGALQPHYHKCLAWLAALLYNFPSRKLKVVGVTGTNGKSTVVHL
VTAILEEAGEKTASASSLRFRINGREWRNTLKMTMPGRFKLQKFLREALSAGCEYAVLEV
TSEGIKQFRHVGTDFYMAVLTNVTPEHIESHGTFENYRAAKAELFKKAKIHILNGDDPSI
DYFLKIPAQNRIIYSKKDLPPGIHLKLLGDFNLENAVAAYHAAKLLGVDFGAIKSALEKI
EGVPGRLEFVQKKPFSVVVDYAHTPDALEKVYIALSHTAYGVRPNLICVLGSAGGGRDKW
KRPEMGKIAGRFCKKIILTNEDPYDELPSAILEDIEKGVSQFLISNSKFLNKFQTQNYKK
VLDRREAIREAIKSAESGDTVIITGKGAEPWIMGPNGTKIAWDDREVAREELSRL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcttttgaattttatcaagcgattgattcccaaacaaatttttggggcattg
cagccgcattatcacaagtgtttggcttggttagcggctctgctgtataatttcccatcg
cggaaattaaaagtcgtaggagtcaccgggaccaacggcaagtccacagtggtgcatctt
gtcacggctattttggaagaggccggagaaaaaaccgcatctgcgtcgtctttgagattt
cgcataaacgggcgggagtggagaaacacgcttaagatgacaatgcccggcagattcaaa
ctgcaaaaatttttgagagaggcccttagcgctggctgcgagtacgctgtgcttgaagtt
acttctgaaggaatcaagcagttccggcacgtcgggactgatttttacatggcagtcctg
accaatgtcactccggagcacatagagtcgcacgggacttttgaaaattaccgcgctgca
aaagctgaacttttcaaaaaagctaaaatccatattttaaacggcgatgacccttcaatt
gattattttttaaaaattcccgcccaaaaccgcataatttattcaaaaaaagatttgccg
ccggggattcatcttaaacttttgggcgatttcaatctggaaaacgctgtcgcggcgtat
cacgcggcgaaacttttgggagttgatttcggcgccataaaaagcgcgctggagaaaata
gaaggcgtgccggggcggctggaatttgttcaaaaaaagccgttctctgtggtggtggat
tacgcgcacactccggacgcgctggaaaaagtttatatcgccttaagccatacggcgtac
ggcgtacggcccaatttaatctgcgttttgggttcggcgggcggcgggcgcgacaaatgg
aaaaggccggagatggggaaaatcgctggcagattctgcaaaaaaattattttgaccaat
gaggacccgtatgacgagctgccttcggctattttggaggatattgaaaaaggcgtctcg
caatttctaatttctaattccaaatttctaaacaaattccaaacccaaaactacaagaaa
gttttggatagaagagaagccattcgcgaagcaataaaatctgcagagtcgggcgacacg
gtaatcatcacaggcaaaggcgccgagccatggattatggggcctaatgggacaaagata
gcgtgggacgacagggaagttgcaagagaggaactttccagattataa
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