Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_0055
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Entry
GbCGDNIH2_0055 CDS
T03083
Name
(GenBank) Malyl-CoA lyase
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
gbh
Granulibacter bethesdensis CGDNIH2
Pathway
gbh00630
Glyoxylate and dicarboxylate metabolism
gbh00660
C5-Branched dibasic acid metabolism
gbh00680
Methane metabolism
gbh00720
Other carbon fixation pathways
gbh01100
Metabolic pathways
gbh01120
Microbial metabolism in diverse environments
gbh01200
Carbon metabolism
Module
gbh_M00346
Formaldehyde assimilation, serine pathway
Brite
KEGG Orthology (KO) [BR:
gbh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GbCGDNIH2_0055
00660 C5-Branched dibasic acid metabolism
GbCGDNIH2_0055
09102 Energy metabolism
00720 Other carbon fixation pathways
GbCGDNIH2_0055
00680 Methane metabolism
GbCGDNIH2_0055
Enzymes [BR:
gbh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
GbCGDNIH2_0055
4.1.3.25 (S)-citramalyl-CoA lyase
GbCGDNIH2_0055
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Gene cluster
GFIT
Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
AHJ67037
UniProt:
A0AAN0RBK9
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All DBs
Position
60127..61122
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AA seq
331 aa
AA seq
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MSKKGEEAMSFTLVEQATPRLHRSELAVPGSNTALFEKSARSAADIIFLDCEDAVAPDEK
DQARKNIIQALNEIDWGNKTMMVRINGLDTHYMYRDVVDIVEACPRLDMILIPKVGTAAD
VYAVDMLVTQIEQAKKREKKIGFEVLIETALGMANVEAIAQSSKRLEAMSFGVADYAAST
RARTTVIGGVNPDYGVLTDRDESGNRDYYWMDQWHFAQSRMMVACRAYGLRPIDGPFGDF
NDPEGYRAAARRAAVLGYEGKWAIHPSQIALANEVFSPSEAEVTKARRILEAMEQAAKEG
RGAVSLDGRLIDIASIRMAEALLAKANQISG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaaaaaaggggaggaagccatgagcttcacgctggtcgaacaagcaacgccgcgc
ctgcatcgctctgaactggcggtgccgggttccaacacagccctgttcgagaaatcggcc
cgctccgccgctgacatcatcttcctcgattgcgaggacgcggtggcaccggatgagaaa
gatcaggcgcgcaagaacatcattcaggccctgaacgaaatcgactggggcaacaagacc
atgatggtacgcatcaatggtctcgacacccactatatgtatcgcgatgtggtcgatatc
gtcgaagcctgtccgcgtctcgatatgatcctgatcccgaaggtcggcacggctgccgat
gtctatgccgtggacatgctggtgacgcagatcgaacaggccaagaagcgcgaaaagaag
atcggcttcgaggttctgatcgaaaccgcactcggcatggcgaatgtggaagctatcgcc
cagtcttcgaagcgtctggaagccatgagcttcggcgtggccgactatgccgccagcacg
cgcgcccgcaccaccgtgatcggcggcgtcaatcccgattacggcgtgctgactgatcgt
gatgagagcggtaatcgcgattattactggatggatcagtggcatttcgcacagagccgc
atgatggtggcctgccgtgcttacggtctgcgcccgattgatggcccgttcggcgatttc
aacgatccggaaggctaccgcgctgctgcccgtcgcgctgccgtgctcggttatgaaggc
aaatgggcgatccacccgagccagatcgcactggcgaacgaggtgttttctccgtccgaa
gcggaagtgaccaaggcgcgccggattctggaagccatggaacaggccgccaaggaaggt
cgtggcgctgtatcactggatggccgtctgatcgatatcgcgtccatccgtatggcggaa
gcgctgctggccaaggccaaccagatctccggctaa
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