Granulibacter bethesdensis CGDNIH2: GbCGDNIH2_2071
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Entry
GbCGDNIH2_2071 CDS
T03083
Name
(GenBank) Malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
gbh
Granulibacter bethesdensis CGDNIH2
Pathway
gbh00020
Citrate cycle (TCA cycle)
gbh00270
Cysteine and methionine metabolism
gbh00620
Pyruvate metabolism
gbh00630
Glyoxylate and dicarboxylate metabolism
gbh00680
Methane metabolism
gbh00710
Carbon fixation by Calvin cycle
gbh00720
Other carbon fixation pathways
gbh01100
Metabolic pathways
gbh01110
Biosynthesis of secondary metabolites
gbh01120
Microbial metabolism in diverse environments
gbh01200
Carbon metabolism
Module
gbh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gbh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gbh_M00012
Glyoxylate cycle
gbh_M00168
CAM (Crassulacean acid metabolism), dark
gbh_M00346
Formaldehyde assimilation, serine pathway
Brite
KEGG Orthology (KO) [BR:
gbh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GbCGDNIH2_2071
00620 Pyruvate metabolism
GbCGDNIH2_2071
00630 Glyoxylate and dicarboxylate metabolism
GbCGDNIH2_2071
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
GbCGDNIH2_2071
00720 Other carbon fixation pathways
GbCGDNIH2_2071
00680 Methane metabolism
GbCGDNIH2_2071
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GbCGDNIH2_2071
Enzymes [BR:
gbh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
GbCGDNIH2_2071
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
Motif
Other DBs
NCBI-ProteinID:
AHJ68069
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Position
complement(2353403..2354377)
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AA seq
324 aa
AA seq
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MPSEGDPMARNKIALIGAGHIGGTLAHLIGLKELGDVVLFDVFGGVAAGKALDIMQSAPV
DGFDSTMVGGSDYAAIAGADVVIVTAGFPRMPGMSRDDLVAKNAEVIAQVAEGIRTHAPD
AFVIVITNPLDAMVWVMQQKSGLPPHKVVGMAGVLDSARFRLFLAHEFNVSVEDVTAFVL
GGHGDTMVPLIRYSTVAGIPVPDLIRMGWTTQEKIDAIVSRTANGGGEIVKLLEKGSAFY
APAASAIAMTESYLKDKKRVMPCAAHLSGQYGIDGLYVGVPVVIGAGGVERVVEISLNEQ
EQAAFDKSCDSVKELIAASRKLIG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
ttgccctcggaaggagaccctatggctcgcaacaaaattgccttgatcggtgccggtcat
attggcggaacgctggcccatctgattggtctcaaggaattgggcgatgttgttctgttc
gacgttttcggtggtgtcgccgccggaaaggcgttggacatcatgcaatccgccccggtg
gacggatttgacagcactatggttggcggctccgactatgccgcgattgccggagcggat
gtcgtgattgtaaccgccggtttcccacggatgccgggcatgtcccgtgacgatctggtc
gctaaaaatgccgaagtgattgctcaggtggccgagggtatccggacgcatgcccccgat
gcgttcgtgattgtcatcaccaatccgctcgatgcgatggtctgggtgatgcagcagaag
agcggcctgcccccgcacaaggtggtcggtatggctggtgtcctcgacagcgcccgtttc
cgtctgttcctggcgcatgaattcaatgtttcggtcgaggatgtgacggccttcgtgctt
gggggccacggcgatacgatggtaccgctgattcgttactctaccgtcgccggtattcca
gtgcctgatctgatccgcatgggatggaccacgcaggaaaaaatcgacgccatcgtcagc
cgtacggccaatggtggcggcgagatcgtcaagctgctggaaaaaggcagtgctttctat
gcgccggcggcctctgccatcgcgatgacggaatcctatctgaaggacaagaagcgggtg
atgccctgcgccgcgcatctgtccggccagtatggcattgacggtctgtatgtcggcgtg
cccgtggtcatcggcgctggcggagtagagcgcgtggtcgaaatctccctgaatgagcag
gaacaggccgccttcgacaaatcctgtgattcagtgaaggagctgattgcagcctcccgg
aaactgatcggctga
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