Citrifermentans bemidjiense: Gbem_0659
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Entry
Gbem_0659 CDS
T00749
Symbol
sfrB
Name
(GenBank) NADPH oxidoreductase, beta subunit
KO
K15022
formate dehydrogenase (NADP+) beta subunit [EC:
1.17.1.10
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00680
Methane metabolism
gbm00720
Other carbon fixation pathways
gbm01100
Metabolic pathways
gbm01120
Microbial metabolism in diverse environments
gbm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
Gbem_0659 (sfrB)
00680 Methane metabolism
Gbem_0659 (sfrB)
Enzymes [BR:
gbm01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.10 formate dehydrogenase (NADP+)
Gbem_0659 (sfrB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Fer4_20
NADH_4Fe-4S
Pyr_redox
DAO
NAD_binding_8
Thi4
FAD_oxidored
Pyr_redox_3
FAD_binding_2
FAD_binding_3
GIDA
Amino_oxidase
PALP
HI0933_like
3HCDH_N
Tctex-1
MCRA
Motif
Other DBs
NCBI-ProteinID:
ACH37686
UniProt:
B5EDA0
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All DBs
Position
782115..784127
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AA seq
670 aa
AA seq
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MAEVVFSSWGRNIVDNRKGGEAKEVSFKLPVSYDGERPLSAFIGWDGIILYNKDVDVPAM
VAEYMKRVQTKYVCGKCTPGKKGTRVMMDALLAIVEGRGSEQDLDTILDLGEVLKHCKCT
LCPSSSVPVIDAVTHFRDAFVNYVRGAKSLSKEFSYIEKYTAPCMDKCPAHIDIPAYIEA
VKDYRFGDSLSTIRDSMPLPSVCGRVCPHPCETACRRKNVDESINIMVLKRSASDYEWQH
GHLPPMVPKEKKSKKVAVVGAGPAGLAAAYYLALEGYPVTIYEALPLGGGMVAVGIPPYR
QPRHLLQRDIDIISSLGVEIVYNTRIGKDITLDELRQKFDAVFLAPGAHRSKPMGVEGED
KGYKGFLTGGIDFLRNVYLGLPTGMGKKVFVVGGGNTAIDCVRVALREGAEESVLVYRRS
RKEMPADVWEVDGADEEGVRFEFQVLPTRVVANDKNEVTGVELIRMAMGEPDASGRRRPE
PVPGSEFVIECDTIIPAIGQDADLSFIPAEAGIDTTKWSTIVTKHIPLSGPDGKALKDGM
GNDLSRTLITNCDGVFAGGDAEIGPLTVVACVGSGHRAANVIARYLEGKGVSLTDQERME
DILTYFGVYDKNENVQWLDSASREHQAEVHGKERASYKNYCEVELGYANSQAVREAERCL
RCYRVAMVAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaggttgttttttccagctggggcagaaacatagttgataaccgcaaggggggc
gaggccaaagaggtcagcttcaagctcccggtcagctacgacggagagcgcccgctttcg
gcctttatcggctgggacgggatcatcctttacaacaaggacgtcgacgtccccgccatg
gtcgccgagtacatgaagcgagtgcagaccaagtacgtctgcggcaaatgcacccccggc
aagaaggggacgcgggtgatgatggacgcgcttctcgccatcgtcgaggggcgcggcagc
gagcaggacctggacaccatcctcgacctgggggaggtgctcaagcactgcaaatgcacc
ctctgcccgagctcgtccgtgccggtcatcgacgccgtcacccacttccgagacgccttc
gtcaactacgtccgcggcgccaagagcctctcgaaggagttcagctacatcgagaagtac
acggctccctgcatggacaagtgcccggcccatatcgacatccccgcctacatcgaggcg
gttaaggactaccgcttcggcgactccctctccaccatccgcgactccatgccgcttccg
tcggtctgcgggcgcgtctgtccgcatccctgcgagacggcctgccgcaggaagaacgtg
gacgagtcgatcaacatcatggtgctgaaaagaagcgcctccgactacgaatggcagcac
ggccaccttccccccatggtccccaaagagaagaagtcgaagaaagtggccgtcgtgggc
gcgggtccggcaggccttgccgcagcctactacctggcgctggaagggtacccggtgacc
atctacgaagcgcttcccctggggggcggcatggtcgcggtggggattcccccgtaccgt
cagccgcgccacctgttgcagcgcgacatcgacatcatctcttcgctcggcgtcgagatc
gtctacaacacccggatcggcaaggacatcacgctggacgagctgaggcagaagttcgac
gcggtctttctcgccccgggcgcgcaccgctcgaaaccgatgggggtcgagggtgaggac
aagggttacaagggtttcctcaccggcggcatcgactttttgagaaacgtctacctgggc
cttcccaccggcatggggaagaaggtcttcgtggtgggcggcggcaacaccgccatcgac
tgcgtcagggtggcgctcagggaaggggccgaggaatcggtgctggtctaccgccgctcc
aggaaagagatgccggctgacgtctgggaggtcgacggggcggacgaggaaggcgtgcgc
ttcgagttccaggtgctcccgacccgcgtcgtcgccaacgacaagaacgaggtcaccggg
gtcgagctgatcaggatggccatgggcgagcctgacgcctccgggcgccgccgtcccgaa
ccggtccccggctccgagttcgtcatcgagtgcgacaccatcatcccggccatcggccag
gatgcggacctttccttcatcccggccgaggcggggatcgacaccaccaagtggagcacc
atcgtcaccaagcacatcccgctctccgggcctgacggcaaggcgctgaaggacggcatg
gggaacgatctctccaggacgctcatcaccaactgcgacggcgtcttcgccgggggcgac
gccgagatcggcccgctcaccgtcgtagcctgcgtgggaagcggccaccgcgccgccaac
gtgatcgcccgctacctcgaagggaaaggggtctcgcttaccgaccaggagcggatggag
gacatcctcacctacttcggcgtctacgacaaaaacgagaacgtccagtggctggacagc
gcctcccgcgagcaccaggcggaggtgcacggcaaggagagggcgagctacaagaactac
tgcgaggtggagcttggctacgccaacagccaggcggtgcgcgaggcggaacgctgcctg
cgctgctaccgcgtcgccatggttgcggtctaa
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