Citrifermentans bemidjiense: Gbem_0901
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Entry
Gbem_0901 CDS
T00749
Symbol
lpxC
Name
(GenBank) UDP-3-O-(3-hydroxyacyl)-N-acetylglucosamine/UDP-3-N-(3-hydroxyacyl)-2-N-acetylglucosediamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00540
Lipopolysaccharide biosynthesis
gbm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Gbem_0901 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gbm01005
]
Gbem_0901 (lpxC)
Enzymes [BR:
gbm01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
Gbem_0901 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
gbm01005
]
Lipid A
Gbem_0901 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
ACH37922
UniProt:
B5EFL8
LinkDB
All DBs
Position
complement(1059490..1060407)
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AA seq
305 aa
AA seq
DB search
MIFQQTLGNKATFSGIGLHTGKTITLTLRPAEAGTGIVFHRVDLAPAVSIEAHASNVVNT
RLSTTIGRGDASVSTIEHLMAALYGCGIDNAHVDIDGPEVPIMDGSAAPFVAAITKAGVK
VSGKARKYLVVKKPVTVVDGDKKATIIPSRHYKISFDMQFAHPAVKSQFRSLEFSQESFI
GDFAAARTFGFLAEVEMMKSHGLALGGSLENAVVIGDNGVINPEGLRFQDEFVRHKILDS
VGDLSLTGHRLIGHVKATKSGHDLNHKLVTELLKRPDCYTLIEFTPQAFNAPFNIGIPEL
SWLEA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatattccagcagaccttgggcaacaaagcaacattcagcggcatcggactgcacacg
ggtaagaccattaccctgacgctgcgcccggccgaggccggaaccggcatcgtcttccac
agggttgacctcgcccccgccgtctcgatcgaggcgcacgcctccaacgtcgtcaacacc
aggctctccaccaccatcggccgcggcgacgcgagcgtttcgaccatagaacacctgatg
gcagccctctacggctgcggcatcgacaacgcccacgtcgacattgacggcccggaagtc
ccgatcatggacggctccgccgccccctttgtggccgcgatcaccaaggccggggttaag
gtttccggcaaggcgcgcaagtacctcgtggttaagaaaccggtgaccgtcgtggacggg
gacaagaaagcgaccatcataccctcgcgccactacaagatctccttcgacatgcagttc
gcccacccggcggtaaagagccagttccgctccctggaattcagccaggaaagcttcatc
ggcgacttcgcggcggccagaaccttcggctttctggccgaggtggagatgatgaagtcc
cacggcctggcgctgggggggtccttggagaacgccgtggtaatcggcgataacggcgtc
atcaacccggaagggctcaggttccaggacgagttcgtgcgccacaagatcctcgactcc
gtaggcgacctctccctcaccggccaccgcctcatcggccacgtgaaggcgaccaagtcg
gggcacgacctgaaccacaagctggtcaccgagcttttgaagcgcccggactgctacacg
ctgatcgagttcaccccccaggccttcaacgctccgttcaacatcggcataccggaactc
tcctggctggaggcttag
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