KEGG   Citrifermentans bemidjiense: Gbem_2309
Entry
Gbem_2309         CDS       T00749                                 
Name
(GenBank) endonuclease III-related DNA glycosidase, HhH-GPD superfamily
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
gbm  Citrifermentans bemidjiense
Pathway
gbm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gbm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Gbem_2309
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gbm03400]
    Gbem_2309
Enzymes [BR:gbm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Gbem_2309
DNA repair and recombination proteins [BR:gbm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Gbem_2309
 Prokaryotic type
     Gbem_2309
SSDB
Motif
Pfam: HhH-GPD EndIII_4Fe-2S Ogg-HhH HHH
Other DBs
NCBI-ProteinID: ACH39321
UniProt: B5EF12
LinkDB
Position
complement(2683020..2683682)
AA seq 220 aa
MKDDQIHQAIAILKDAVLTKGWVTPAVTIVATQDRDPYKVLVSCILSLRTRDQTTAEASQ
RLFALADTPQKMTELSVPEIEQAIYPVGFYRVKAQQILELSFQIGELHQGRVPDELETLL
TFKGVGRKTANLVLTLGYGKPGICVDIHVHRICNRWGYVKTVNPEQTEGALRKKLPPEYW
IIINDLLVTFGQNQCTPVSPRCSTCPLYALCDRVAVTKSR
NT seq 663 nt   +upstreamnt  +downstreamnt
atgaaggacgatcagatacaccaggccatcgccatcctcaaggatgcggtgctgacaaaa
gggtgggtgactccggcggtcactatcgtggctacgcaggaccgcgacccctacaaggtg
ctggtctcctgcattctatccctgcgaacccgcgatcagaccacagccgaggcttcccag
cgcttgtttgcgcttgccgatacaccgcagaagatgacggaactcagtgtccccgagatc
gagcaggccatctaccccgtcgggttttaccgggtcaaggcacagcagattttagaactc
tcgttccaaatcggtgagctgcaccaggggagggtgcccgacgaattggagaccctgctg
actttcaagggagtggggcgcaagacggcgaacctggtgctgacgcttggatacggcaag
cccggcatctgcgtcgacattcacgtgcacaggatctgcaacaggtgggggtatgtaaaa
acagtcaatcctgagcagacagagggtgctttgagaaagaagctcccgcccgagtactgg
atcataatcaacgatcttctagtgactttcgggcaaaaccagtgcacacctgtctcaccg
cgctgctccacctgtcccctctatgcgctctgtgacagggtcgctgttactaagtctaga
taa

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