KEGG   Citrifermentans bemidjiense: Gbem_2900
Entry
Gbem_2900         CDS       T00749                                 
Symbol
mdh
Name
(GenBank) malate dehydrogenase, NAD-dependent
  KO
K00024  malate dehydrogenase [EC:1.1.1.37]
Organism
gbm  Citrifermentans bemidjiense
Pathway
gbm00020  Citrate cycle (TCA cycle)
gbm00270  Cysteine and methionine metabolism
gbm00620  Pyruvate metabolism
gbm00630  Glyoxylate and dicarboxylate metabolism
gbm00680  Methane metabolism
gbm00710  Carbon fixation by Calvin cycle
gbm00720  Other carbon fixation pathways
gbm01100  Metabolic pathways
gbm01110  Biosynthesis of secondary metabolites
gbm01120  Microbial metabolism in diverse environments
gbm01200  Carbon metabolism
Module
gbm_M00009  Citrate cycle (TCA cycle, Krebs cycle)
gbm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gbm_M00168  CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:gbm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    Gbem_2900 (mdh)
   00620 Pyruvate metabolism
    Gbem_2900 (mdh)
   00630 Glyoxylate and dicarboxylate metabolism
    Gbem_2900 (mdh)
  09102 Energy metabolism
   00710 Carbon fixation by Calvin cycle
    Gbem_2900 (mdh)
   00720 Other carbon fixation pathways
    Gbem_2900 (mdh)
   00680 Methane metabolism
    Gbem_2900 (mdh)
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    Gbem_2900 (mdh)
Enzymes [BR:gbm01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.37  malate dehydrogenase
     Gbem_2900 (mdh)
SSDB
Motif
Pfam: Ldh_1_N Ldh_1_C UDPG_MGDP_dh_N Glyco_hydro_4C
Other DBs
NCBI-ProteinID: ACH39903
UniProt: B5EIU8
LinkDB
Position
complement(3344407..3345360)
AA seq 317 aa
MARKKIALIGGGQIGGVLAQLAALRELGDVVMFDIVEGLPQGKMLDIAEVGSVDGFDCNL
KGTNSYEDIKGADVVIVTAGLPRKPGMSRDDLIEVNSKIMTSVAEGIKANAPNAFVIVIS
NPLDAMVTLCQKITGFPYNRVIGQAGVLDSARFKTFIAWELGVSVKDVNAMTLGGHGDDM
VPLVRYASVNGIPVMELLEKKYKDKAKAKEVMEAMVKRTRGAGGEVVALLKTGSAFYSPA
SSAIQMAESILKDQKRVLPTCAHLNGEFGVKGFYVGVPCVLGENGVEQILEFELDAEEQA
MMDKSVAAVKELVGSMK
NT seq 954 nt   +upstreamnt  +downstreamnt
atggcacgtaagaaaatcgcacttatcggtggtggacagattggcggcgtacttgctcag
cttgcagctctgcgcgaactgggtgacgtagtaatgttcgacatcgtcgaaggcctgccg
cagggcaagatgctcgacatcgccgaagtcggctctgtcgacggcttcgactgcaacctg
aaagggaccaacagctacgaggacatcaaaggcgccgacgtggtcatcgtcaccgcaggc
cttccccgcaaaccgggcatgagccgcgacgacctgatcgaggtcaactccaagatcatg
acctccgtggctgaggggatcaaggccaacgcacccaacgcgttcgtcatcgtcatctcc
aacccgctcgacgccatggttaccctctgccagaagatcaccggcttcccctacaaccgc
gtcatcggccaggccggcgtgctcgactccgcacgcttcaaaaccttcatcgcttgggaa
ctgggcgtttccgtgaaagacgtcaacgccatgaccctgggcggccacggcgacgacatg
gtgccgctggtacgttacgcctctgtgaacgggatccccgtcatggaactcctcgagaag
aaatacaaagacaaagccaaggctaaagaagtcatggaagccatggtcaagaggacccgc
ggtgcaggcggcgaggttgttgctctcctcaaaaccggttccgcattctactccccggct
tcctccgccatccagatggctgaatcgatcctcaaggatcaaaagcgcgtcctcccgacc
tgcgctcacctgaacggcgagttcggcgtgaaaggcttctacgtcggcgttccctgcgtg
ctgggcgagaacggcgtcgagcagatcctcgagttcgaactggacgcagaagagcaggcg
atgatggacaagtccgtcgcagccgtcaaggaactcgtaggttccatgaagtaa

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