Citrifermentans bemidjiense: Gbem_3809
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Entry
Gbem_3809 CDS
T00749
Symbol
thiC-2
Name
(GenBank) 4-amino-5-hydroxymethyl-2-methylpyrimidine-phosphate synthase
KO
K22466
5-hydroxybenzimidazole synthase [EC:
4.1.99.23
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00860
Porphyrin metabolism
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Gbem_3809 (thiC-2)
Enzymes [BR:
gbm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.23 5-hydroxybenzimidazole synthase
Gbem_3809 (thiC-2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
DUF4368
Motif
Other DBs
NCBI-ProteinID:
ACH40801
UniProt:
B5EEL5
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All DBs
Position
complement(4349007..4350314)
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AA seq
435 aa
AA seq
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MMTQIESARAGITTQQMAQVAFDENLTPEYVREKVALGQIVIPWNHVRKPKVAGIGAGLR
TKVNASIGTSSDIIDYAAEVKKGLAAQESGADTLMELSVGGDLDRVRREVIAAVDLPVGN
VPLYQAFCEASRKYGDPNKLDEEMLFDIIERQCADGMAFMAVHCGINLYTIERLRKQGYR
YGGLVSKGGVSMAAWMIANNRENPLYEKFDRVVEILKRYDTVLSLGNGLRAGAIHDSSDR
AQIQELLINCELAELGRDMGCQMLVEGPGHVPLDEIEGNIKLQKRMSGGAPYYMLGPIAT
DVAPGFDHITAAIGAAQSSRYGADLICYITPAEHLALPNEEDVRMGVKAAKIAAYIGDMN
KYPEKGRERDKEMSKARRDLDWQRQFELALFPEDAAAIRKSRVPEDEQTCTMCGDFCASR
GAGKIFAGDLRGDKI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgatgacacagatagaatcggcgcgtgccggcattaccacccagcagatggcgcaggtg
gctttcgacgaaaatctgacgccggagtacgttcgggagaaggtggcgctgggacagatc
gtgatcccctggaaccatgtcaggaagccgaaggtggccgggatcggcgcgggtctcagg
accaaggtgaacgcctccatcgggacctcctccgacatcatcgattacgcggcggaggtg
aagaaggggctcgcggcgcaggaatccggagcagacaccctgatggaactttccgtcgga
ggggacctggaccgggtgcggcgcgaggtgattgcggcagtggatctccccgtcggcaac
gtccccctctaccaggctttctgcgaggcctccaggaagtacggcgaccccaacaagctg
gacgaggagatgctcttcgacatcatcgaaaggcagtgtgccgacggcatggccttcatg
gcggtgcactgcggcatcaacctctacacgatcgaacgcctgaggaagcaggggtaccgc
tacggcggcctggtttccaagggtggggtgagcatggcggcctggatgatcgccaacaac
cgagaaaatccgctctacgagaagttcgaccgcgtggtggagatcctgaagcgctacgac
accgtgctgtcgctggggaacggcctcagagccggcgccatccacgattcgagcgaccgg
gcgcagatccaggagcttttgatcaactgcgagctggcggaactcgggcgcgacatgggg
tgccagatgctggtggaggggccgggacacgtgcctctggacgagatcgaggggaacatc
aagctgcagaagcggatgagcggcggcgccccctactacatgctggggcccatcgccacc
gacgtcgcccccggcttcgaccacatcaccgcggccatcggtgcagcgcagtcttcccgc
tatggcgccgacttgatctgctacatcaccccggccgagcacctggcgcttcccaacgaa
gaggacgtccgtatgggggtgaaggccgccaagatcgccgcctacatcggcgatatgaac
aagtaccccgagaagggtagggagcgcgacaaggagatgagcaaggccagaagggacctg
gactggcagcgccagttcgagctcgccctgttccccgaggatgccgccgccatcaggaag
agccgcgtccccgaagacgagcagacctgcaccatgtgcggcgacttctgcgcctcccgc
ggcgccggcaagatcttcgccggcgatctccggggtgacaagatttga
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