Citrifermentans bemidjiense: Gbem_4004
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Entry
Gbem_4004 CDS
T00749
Name
(GenBank) efflux pump, RND family, inner and outer membrane proteins
KO
K18138
multidrug efflux pump
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm01501
beta-Lactam resistance
gbm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Gbem_4004
01503 Cationic antimicrobial peptide (CAMP) resistance
Gbem_4004
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gbm02000
]
Gbem_4004
01504 Antimicrobial resistance genes [BR:
gbm01504
]
Gbem_4004
Transporters [BR:
gbm02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Gbem_4004
Antimicrobial resistance genes [BR:
gbm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Gbem_4004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
OEP
MMPL
Baseplate_J
SecD_SecF_C
Fervidolysin_NPro-like
Motif
Other DBs
NCBI-ProteinID:
ACH40996
UniProt:
B5EG83
LinkDB
All DBs
Position
complement(4543050..4547462)
Genome browser
AA seq
1470 aa
AA seq
DB search
MILSDLSIKRPVFAAVLMLALVTLGLFSYRRLSVEMFPSVEIPVISVVTKFPGASPESIE
REVSKKIEEAVNQIAGVKHVMSYSREGVSTVVVEFRLEEKINEASQEARAKIAGIRGNLP
TGIEDPIIQKLDFNALPVVSLAVKGRGLDTKELTTLVDKQIKRRLENVSGVGKVDVVGSA
KREVTVTIDPVRLEALGLGVDAVVAGLKSENVNTPLGRLTHGGNEYPIRISGKPGQVEGF
RNMVIAQRGGRGITLSEVAEVTDGAKEQRSLALINGEPAVALDVLKQSGANMVEVVDGVK
KSVEKLRKELPPGVEVTVVRDASIPTRESLADVKETMLIGGLLTVIIVFCFINSWRSTVI
TGLTLPISVVSSFIVMNAMGMTLNIMTMMALSLAIGLLIDDAIVVRENIVRHLEHGEDHL
TAARIGTSEIGLAVFATSMSIVAVFVPVAFMRGIVGRFFFQFGMTVAFAVLVSLFVSFTL
DPMLSSRWHDPAIELKGRRKGIARLLDRFNDRFDAWADSYRKAISWALNHRKTVLAAAFL
SFAAGIAIFGTLESSFMTNDDKGEFQVVFKTAPDASIAESTDRLKAVLAVIKGVPEVEHT
YASIGAGDSGTVQSGALYVKLKEKAHRKRSQEEVQQAFREKLKAIPGITTSIERVGDVGG
AQKPLQVNLKGEDIPTLKRYAAQLKQEIYKIPGVVDLEVTLDHDIPEYRMTVDRARAQDA
GVNTNDIASTVSRLVGGEAVTTYEDEDGDAVDLRVRLPEALRRDPGQVRDLKLAVAKGDE
TALVPLANLVSYEVSNTPSEINRRDLSRLVTISANLDGLPIGTAVEKVKEAAARVPMQPG
YSVGFSGEAEDMAESFGYMAESLIIAIIFVYLILAAQFESFLEPLAIMLSLPLSVVGMAG
MLKLTGDTVNIMSLIGLIMLMGLVTKNAILLVDYAKVLQGRGMDRFQAVVEAGRTRLRPI
VMTTLAMIFGMLPLFFALGSGAEMRAPMARAVVGGLLTSTLLTLLVVPVMYTVLDDLEEW
LRRKWKGKKARGAGQAAVLLLGLSLTLALTPGLCLAGEARTLTLDDALSIAMEQNRDIQK
ARAYAQLVQGKYLEERAAALPSLALNASADYVRDNSQSAFTGGISSSRQRLADLRLTQTL
FSWGKIGAAIRGAKEGMKTAEDQLRLFQQAARRDVTVSFYDVLLAKELRALALSNLQQKE
RHLAEAVKRLAAGVATDYDVLAARVGVDNARPELIRRENAIKTAKERLRLVLALEPGELE
VTGVLQAVPVPIPAFEESLTLARRMRPELSDLKHRVGISRELVEIAAAENKPQLDLRGGF
GYHQLEAAGRDWQGTAYDVGLFLTFPFFDGFKTKGKVEQAKSDLRTRELEQAQQLDAVSL
EVRDAGFNVTEAAEILKALSGTVTQAERLLGMAEQGYQLGVKTRLEVEDAEANLVQARSN
LAQARRDYQVSLVNLTWATGVLGEVPLSAL
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgatcctttccgacctgtccataaaacgccccgtgttcgcggcggtgctgatgctcgcc
ctggttaccctggggcttttctcctaccgcaggctttccgtcgagatgttcccgagcgtg
gagatcccagttatctccgtcgtcaccaagttccccggcgcctcccccgagagcatcgag
cgcgaggtctccaagaagatcgaggaggcggtgaaccagatcgccggggtcaagcacgtg
atgtcctactcccgggagggggtctccacggtggtggtggagttcaggctcgaagagaag
atcaacgaggcctcccaggaggcgcgggcgaagatcgccggcatccggggcaatctcccc
accggcatcgaggatcccatcatccagaagctcgacttcaacgcgcttccggtggtctcc
ttggcggttaaggggagggggctcgacaccaaggagctgaccaccctggtcgacaagcag
atcaagcgtcgcctggagaacgtttccggggtcggcaaggtcgacgtggtcggctccgcc
aagcgcgaggtgacggtcaccatcgacccggtccgcctggaggcgctagggctcggggtc
gacgcggtggtggcggggctgaaaagcgagaacgtcaacactccgctgggtcgcctgacc
cacggggggaacgagtacccgatccgcatctccggaaagccggggcaggtggaagggttc
cgcaacatggtgatcgcgcagcggggcggccggggcatcaccttgtccgaggtggccgag
gtcaccgacggcgccaaggagcagcgctcgctcgccctcatcaacggggagccggcggtg
gcgctcgacgtcttgaagcagtccggcgccaacatggtcgaggtggtcgacggggtcaaa
aagagcgtggagaagctcaggaaggagcttccccccggggtcgaagtgaccgtcgtgcgc
gacgcctccatccccacccgcgagtcgctggccgacgtgaaggagaccatgctgattggc
gggctcttgaccgtcatcatcgtcttttgcttcatcaactcctggcgctcgacggtgatc
accgggcttaccctccccatctcggtcgtctcctcgttcatcgtcatgaatgccatgggg
atgaccctgaacatcatgacgatgatggcgctctcgctggccattggccttttgatcgac
gacgccatcgtggtgcgggagaacatcgtgcgccacctggagcacggcgaggaccacctg
accgccgcccggatcggcacctccgagatcggcctcgcggtattcgccacctccatgtcc
atcgtggcggtcttcgtcccggtagccttcatgcgcggcatcgtcgggcgcttcttcttc
cagttcgggatgaccgtcgccttcgcggtgctggtttccctcttcgtctcctttaccctc
gaccccatgctctcctcgcgctggcacgaccctgccatcgagctcaagggaaggcgcaag
gggatagccaggctcctggaccggttcaacgaccgcttcgacgcctgggccgactcctac
cgcaaggccatctcctgggctctcaaccatcgcaaaaccgtgctggcagcggcctttctc
tcctttgcggccggcatcgccatcttcgggaccctggaatcgtccttcatgaccaacgac
gacaagggtgagtttcaggtggtgttcaagaccgcccccgacgcgagcatagccgagagc
accgaccggttgaaggcagtactcgccgtgatcaagggggtccccgaggtggagcacacc
tacgcctccatcggggcgggggacagcggcaccgtccagtccggggcgctctacgtgaag
ctcaaggagaaggcgcaccgaaaaaggagccaggaagaggtgcagcaggcattccgcgag
aagctgaaggcgattcccgggatcaccacatccatcgagcgggtgggggacgtgggcgga
gcccagaagccgctccaggtgaacctcaagggggaggatatcccgaccctcaagcgctac
gccgcccagcttaagcaggagatctacaagatccccggggtcgtcgacctggaggtgacc
ctggatcacgacatccccgagtaccggatgaccgtggaccgcgcccgcgcccaggacgcc
ggggtcaacaccaacgacatcgcctccaccgtttcgcgcctggtggggggggaggccgtc
accacctacgaggatgaggacggcgacgcggtcgacctgagggtgcgcctccccgaagcg
ctgcgccgcgaccccggccaggtgcgcgacctgaagctcgccgtggccaagggggacgag
accgccctggtgccgctggcgaacctggtgagctacgaggtcagcaacaccccctccgag
atcaaccgccgcgacctttcccgcctggtgaccatcagcgcgaacctggacgggctcccc
atcggcactgcggtggagaaggtcaaggaggccgcggcgcgggtccccatgcagcccggg
tacagcgtcggcttctccggcgaggccgaggacatggcggagtccttcggttacatggcc
gaatcgctcatcatcgccatcatcttcgtctacctgatcctcgcggcccagttcgagtcg
ttcctggagcctttggccatcatgctttcgctgccgctctcagtcgtagggatggcgggg
atgctgaagctcaccggggacacggtcaacatcatgtcgctcataggcctcatcatgctg
atggggttagtcaccaagaacgccatactcctcgtcgattacgcgaaggtgctgcagggg
agggggatggaccgattccaggcggtggtggaggcggggaggacgaggcttaggccgatc
gtcatgaccacccttgccatgatcttcgggatgctgccgctcttcttcgcgctgggaagc
ggcgccgagatgagggcgcccatggcgcgcgccgtcgtcggggggctgttgacctcgacc
cttctgacccttttggtggtgccggtcatgtacacggtgctggacgacctggaggagtgg
ctcaggcggaaatggaaggggaagaaggcgcgcggcgcgggacaggcggcggtgcttctc
ctcggcctctcgcttaccctggcgcttaccccggggctgtgccttgcgggggaggcgcgg
accctcaccctggacgacgccctttccatcgccatggagcagaaccgggacatccagaag
gcgcgcgcctacgcgcagctggtacaggggaaatacctggaggagcgcgccgccgctctc
ccctcgcttgcgctgaacgcctccgccgactacgtgagagacaacagccagagcgccttc
accggggggatctcgtcctcccggcagcgcctggccgatctccggcttacccagaccctc
ttcagctggggtaagatcggggccgccatccgcggagccaaggaagggatgaagaccgcc
gaggaccagctccgcctcttccagcaggcggcccgccgggacgtcaccgtctccttttac
gacgtgcttttggccaaagagctgagggcgctcgccctttccaacctgcagcagaaggag
cgtcacctggcagaggcggtaaagaggctggcggcaggcgtcgccaccgactacgatgtc
ctcgcagccagagtcggggtcgacaacgcacgtcccgagctgatccgcagggagaacgcc
atcaagaccgccaaggagcgcctgaggctggtgctggcgctggagccgggggagctggaa
gtgacaggcgtgctgcaggctgttccggtcccgatcccggccttcgaagaatccctgacc
cttgcccggcggatgcgtccggagttgtccgatctcaagcaccgggtggggatttcgcgg
gaactggtcgagatagccgcggccgagaacaagccccagctcgacctgcgggggggcttc
gggtaccaccagctggaagcggcgggaagagactggcagggtactgcctacgacgtcggc
ctgttccttacctttcccttcttcgacggctttaagaccaaggggaaagtcgagcaggcc
aagagcgacctgaggacccgcgaactggagcaggcccagcagctcgacgccgtctccctc
gaagtgcgggacgccggcttcaacgtcaccgaagcagccgagatactgaaagcattgtcg
gggacggtcacccaggccgagcgacttttgggcatggccgagcaggggtatcagcttggg
gtgaaaaccaggctggaggtcgaggatgccgaggccaacctggtgcaggcaaggagcaac
ctggcccaggcccgccgcgactaccaagtctccctggtcaacctgacctgggccacaggt
gtattgggcgaggtgcctctctcagcgctttga
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