Citrifermentans bremense: GEOBRER4_21620
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Entry
GEOBRER4_21620 CDS
T07006
Symbol
nth_1
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gbn
Citrifermentans bremense
Pathway
gbn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GEOBRER4_21620 (nth_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gbn03400
]
GEOBRER4_21620 (nth_1)
Enzymes [BR:
gbn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GEOBRER4_21620 (nth_1)
DNA repair and recombination proteins [BR:
gbn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GEOBRER4_21620 (nth_1)
Prokaryotic type
GEOBRER4_21620 (nth_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
EndIII_4Fe-2S
HHH
AH_C
Motif
Other DBs
NCBI-ProteinID:
BCG47412
UniProt:
A0A6S6LZB0
LinkDB
All DBs
Position
complement(2487566..2488201)
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AA seq
211 aa
AA seq
DB search
MAILEDAVRTRGWVTPAVTIVATQDRDPYKVLVSCILSLRTRDQVTAEASQRLFALADTP
QKMALLEVAKIERAIYPVGFYRVKAQQILELSFQLCELYQGRVPDELETLLTFKGVGRKT
ANLVLTLGYGKPGICVDIHVHRICNRWGYVKTGTPEQTELALRKKLPPEYWIIINDLLVT
FGQNQCTPVSPRCSTCPLYALCDRVAVIKSR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggccatccttgaagatgcggtgcggactcgggggtgggtgactcccgcggtcaccatc
gtggccacgcaggaccgggacccctacaaggtgctggtttcctgcatcctttccttaagg
acccgcgaccaggtaacagccgaggcctcgcagcggctctttgcactcgccgacacgccg
cagaagatggctctgctcgaagtggcgaaaatcgagcgggcgatctacccagttgggttc
taccgggtcaaggcccagcagattttagaactctcgttccaactttgcgaactgtaccag
gggagggtgccggacgagttggagacgctcctgaccttcaagggagtggggcgtaagacg
gctaacctggtgctgacgcttggatacggcaagcccggcatctgcgtcgacattcacgtg
cacaggatctgcaacaggtggggctatgtgaaaacaggcacacccgagcagacagaactt
gccttaaggaaaaagcttccgccggagtactggatcataatcaacgatcttctagtgact
ttcggacagaaccagtgcacacccgtctccccgcgctgctctacctgtcccctgtacgcg
ctctgtgacagggtggcagttatcaagtctagataa
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