Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_0055
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Entry
GbCGDNIH4_0055 CDS
T03156
Name
(GenBank) Malyl-CoA lyase
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs00630
Glyoxylate and dicarboxylate metabolism
gbs00660
C5-Branched dibasic acid metabolism
gbs00680
Methane metabolism
gbs00720
Other carbon fixation pathways
gbs01100
Metabolic pathways
gbs01120
Microbial metabolism in diverse environments
gbs01200
Carbon metabolism
Module
gbs_M00346
Formaldehyde assimilation, serine pathway
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GbCGDNIH4_0055
00660 C5-Branched dibasic acid metabolism
GbCGDNIH4_0055
09102 Energy metabolism
00720 Other carbon fixation pathways
GbCGDNIH4_0055
00680 Methane metabolism
GbCGDNIH4_0055
Enzymes [BR:
gbs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
GbCGDNIH4_0055
4.1.3.25 (S)-citramalyl-CoA lyase
GbCGDNIH4_0055
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Gene cluster
GFIT
Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
AHJ64416
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Position
60183..61178
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AA seq
331 aa
AA seq
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MSKKGEEAMSFTLVEQATPRLHRSELAVPGSNTALFEKSARSAADIIFLDCEDAVAPDEK
DQARKNIIQALNEIDWGNKTMMVRINGLDTHYMYRDVVDIVEACPRLDMILIPKVGTAAD
VYAVDMLVTQIEQAKKREKKIGFEVLIETALGMANVEAIAQSSKRLEAMSFGVADYAAST
RARTTVIGGVNPDYGVLTDRDESGNRDYYWMDQWHFAQSRMMVACRAYGLRPIDGPFGDF
NDPEGYRAAARRAAVLGYEGKWAIHPSQIALANEVFSPSEAEVTKARRILEAMEQAAKEG
RGAVSLDGRLIDIASIRMAEALLAKANQISG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaaaaaaggggaggaagccatgagcttcacgctggtcgaacaagcaacgccgcgc
ctgcatcgctctgaactggcggtgccgggttccaacacagccctgttcgagaaatcggcc
cgctctgccgctgacatcattttcctcgattgcgaggacgcggtggcaccggatgagaaa
gatcaggcgcgcaagaacatcattcaggccctgaacgaaatcgactggggcaacaagacc
atgatggtacgcatcaatggtctcgacacccactatatgtatcgcgatgtggttgatatc
gtcgaagcctgcccgcgtctcgatatgatcctgatcccgaaggtcggcacggctgccgat
gtctatgccgtggacatgctggtgacgcagatcgaacaggccaagaagcgcgaaaagaag
atcggcttcgaggttctgatcgaaaccgcactcggcatggcgaatgtggaagctatcgcc
cagtcttcgaagcgtctggaagccatgagcttcggcgtggccgactatgccgccagcacg
cgcgcccgcaccaccgtgatcggcggcgtcaatcccgattacggcgtgctgaccgatcgt
gatgagagcggcaatcgcgattattactggatggatcagtggcatttcgcacagagccgc
atgatggtggcctgccgtgcttacggtctgcgtccgatcgatggtccgttcggggatttc
aacgatccggaaggctatcgcgccgctgcccgtcgtgccgccgtgctcggttatgaaggc
aagtgggcgatccatccgagccagatcgcgctggcgaacgaggtgttttctccgtccgaa
gcggaagtgaccaaggcgcgccggattctggaagccatggaacaggccgccaaggaaggt
cgtggtgctgtatcactggatggccgtctgatcgatattgcgtccatccgtatggcggaa
gcgctgctggccaaggccaaccagatctccggctaa
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