Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_2071
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Entry
GbCGDNIH4_2071 CDS
T03156
Name
(GenBank) Malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs00020
Citrate cycle (TCA cycle)
gbs00270
Cysteine and methionine metabolism
gbs00620
Pyruvate metabolism
gbs00630
Glyoxylate and dicarboxylate metabolism
gbs00680
Methane metabolism
gbs00710
Carbon fixation by Calvin cycle
gbs00720
Other carbon fixation pathways
gbs01100
Metabolic pathways
gbs01110
Biosynthesis of secondary metabolites
gbs01120
Microbial metabolism in diverse environments
gbs01200
Carbon metabolism
Module
gbs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gbs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gbs_M00012
Glyoxylate cycle
gbs_M00168
CAM (Crassulacean acid metabolism), dark
gbs_M00346
Formaldehyde assimilation, serine pathway
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GbCGDNIH4_2071
00620 Pyruvate metabolism
GbCGDNIH4_2071
00630 Glyoxylate and dicarboxylate metabolism
GbCGDNIH4_2071
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
GbCGDNIH4_2071
00720 Other carbon fixation pathways
GbCGDNIH4_2071
00680 Methane metabolism
GbCGDNIH4_2071
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GbCGDNIH4_2071
Enzymes [BR:
gbs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
GbCGDNIH4_2071
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
Motif
Other DBs
NCBI-ProteinID:
AHJ65457
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All DBs
Position
complement(2339055..2340029)
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AA seq
324 aa
AA seq
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MPSEGHPMARNKIALIGAGHIGGTLAHLIGLKELGDVVLFDVFGGVAAGKALDIMQSAPV
DGFDSTMVGGSDYAAIAGANVVIVTAGFPRMPGMSRDDLVAKNAEVIAQVAEGIRTHAPD
AFVIVITNPLDAMVWVMQQKSGLPPHKVVGMAGVLDSARFRLFLAHEFNVSVEDVTAFVL
GGHGDTMVPLIRYSTVAGIPVPDLIRMGWTTQEKIDAIVSRTANGGGEIVKLLEKGSAFY
APAASAIAMTESYLKDKKRVMPCAAHLSGQYGIDGLYVGVPVVIGAGGVERVVEISLNEQ
EQAAFDKSCDSVKELIAASRKLIG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
ttgccctcggaaggacaccctatggctcgcaacaaaattgccttgatcggtgccggtcat
attggcggaacgctggcccatctgattggtctcaaggaattgggcgatgttgtgctgttc
gacgttttcggtggtgtcgccgccggaaaggcgttggacatcatgcagtccgccccggtg
gacggatttgacagcaccatggtcggcggctccgactatgccgcgattgccggggcgaat
gtcgtgattgtaaccgccggtttcccacggatgccgggcatgtcccgtgacgatctggtc
gctaaaaatgccgaagtgattgctcaggtggccgagggtatccggacgcatgcccccgat
gcgttcgtgattgtcatcaccaatccgcttgatgcgatggtctgggtgatgcagcagaag
agcggcctgcccccacacaaggtggtcggtatggcgggtgtcctcgacagcgcccgtttc
cgtctgttcctggcgcatgaattcaatgtttcggtcgaggatgtgacggccttcgtgctt
gggggccacggcgatacgatggtaccgctgattcgttactctaccgtcgccggtattccg
gtgcctgatctgatccgcatgggatggaccacgcaggaaaaaatcgacgccatcgtcagc
cgtacggccaatggtggcggcgagatcgtcaagctgctggaaaaaggcagtgctttctat
gcgccggcggcctctgccatcgcgatgacggaatcctatctgaaggacaagaagcgggtg
atgccctgcgccgcgcatctgtccggccagtatggcattgacggtctgtatgtcggcgtg
cccgtggtcatcggcgctggcggagtagagcgcgtggtcgaaatctccctgaatgagcag
gagcaggccgccttcgacaaatcctgtgattcagtgaaggagctgattgcagcctcccgc
aaactgatcggctga
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