Gymnogyps californianus (California condor): 127015822
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Entry
127015822 CDS
T08687
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04530
Tight junction
gcl04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127015822
09142 Cell motility
04810 Regulation of actin cytoskeleton
127015822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gcl04990
]
127015822
Domain-containing proteins not elsewhere classified [BR:
gcl04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
127015822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
Tiam_CC_Ex
RhoGEF
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_2
PDZ_6
RNA_pol_Rpc82
PH_11
GNAT_acetyltran
Motif
Other DBs
NCBI-GeneID:
127015822
NCBI-ProteinID:
XP_050751957
LinkDB
All DBs
Position
1:103484150..103568285
Genome browser
AA seq
1573 aa
AA seq
DB search
MGNAESQSVEHAFYGDKHTSLGRKHTSRSLRLSNKASRRTRHASSGKIIHRNSEVSTRSS
STPSIPQSLAENGLEPFAQEANLEDFGSPIWVDRVDMGLRPVSYHTDSSVTPSVDSSTVL
TAASVQSMPDSEESRLYGDEPPFLVGGDGRSHRYAANGTNFMETASFKKKRSKSADIWRE
DSLEFSLSDLSQEHLTSNEEILGLAEEKDAEATRGTEASGSPQPLVTCQRANSMSDLYSP
KSPSTTVNGGPRNAFGGYGRNLVSDIPDIGSHKMASVTAEDAPSYSNYNTLPCRKSHCLS
EGATNPQISHSNSMQGRRAKTTQDVNAGEGSEFTDSGIEGAATDTDLLSRRSNATNSSYS
PPASRAFIGSDSGSSSTGDGLRQGVYENFRRELEMSTTNSENLEEAGSALSDEQSSGTLS
SPGQSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVESATRRKWKHYWVSLKGCTLFFYE
TDGRSGIDHNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTSSQTELENW
ITAIHSACATAVARQHHKEDTVKLLKTEIKKLEQKIDMDEKMKKMGEMQLSSVTDSKKKK
TILDQIFVWEQNLEQFQMDLFRYRCYLASLQGGELPNPKRLLAFASRPTKVAMGRLGIFS
VSSFHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTTSKKKQGRPSINQREKE
VALSSVHQHNPDCDIWVHEYFTPSWFCLPNNQPALTVIRPGDTTRDVLEIICKTHQLDHS
AHYLRLKFLIENQIQFYVPKPEEDIYELLYKEIEICQKITQHIQIEKSDASSDIYGFSLS
SVEEEGIRRLYVNGVKETGLAFKKGLKAGDEIVEINKKAAEDLDSALLKDALVQPSLCLT
VRTYPEIEEGQKLMQPPPRRLENPSDLSDSALAFAGSNQGHSLCGDPDSSVETAPEEAEA
QDLESSDEADKMSKSTEQVAAFCRSLHEMNPSDSSAHPQEFTGPQLATMRQLTDADKLRK
VICELLETERTYVKDLNCLMERYLKPLQKETFLTPDELDVLFGNLTEMVAFQVEFLKTLE
DGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKVPKVLVKAKTDT
AFKAFLDAQNPRRQHSSTLESYLIKPIQRILKYPLLLKELFALTDVDSEEHYHLDVAIKT
MNKVASHINEMQKIHEEYGAVFDQLIAEQTGEKKEVADLSMGDLLLHNTVIWLNPPASLG
KWKKEPELAAFVFKTAVVLVYKDGSKQKKKLGGSHRASIYEDWDPFRFRHMIPLEALQVR
ALASADAETNSVCEIVHVKSESEGRPERTFHLCCSSPEHRKDFLKAVHSILRDKHRRQLL
KTESLPSSQQYVPFGGKRLCALKGARPAMNRAVSAPSKSLGRRRRRLARNRFTIDSDAVY
TSSPEKEPQQPTHSGDTDRWVEEQFDLAQYEEQEDIKETDILSDDDEYCEAMRGAVADRD
LRERLEAASITSSQPYRGDRPHPAMDTHASRMTQLKKQAALSGINGDVEGHGEEVIWVRR
EDFVPSRKLNTEL
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgcggagagccagagcgtggagcacgccttctacggagacaagcacaccagc
ctcggccgcaagcacacttcccgctcgcttcgcctctccaataaagcctctcgccggaca
cggcatgcttcttctggaaaaattatccaccgtaactcggaagtgagcacccgctccagc
agcacccccagcatcccccagtccctggcagagaacggcctggagcccttcgcccaggag
gccaacctagaggactttggaagccccatctgggtggaccgtgtggacatgggcctgcgg
cccgtttcctaccacactgactcctccgtcacccccagtgtggacagcagcaccgtcctc
actgccgcctctgtccagagcatgcccgactcagaggagagcaggctttatggggatgag
ccgccgttcctggtggggggtgacgggaggtcacatcgatacgcggccaacgggacaaac
ttcatggagacggccagcttcaagaagaagcgctccaaatcggccgacatctggcgtgag
gacagcttggagttttcgctttctgacctcagccaggagcatttaacgagcaacgaggaa
atcctgggcttggccgaggagaaggatgctgaggccacccgggggacagaggccagtggc
agcccccagccgctggtcacctgccagcgcgccaactctatgagcgacttgtattccccc
aaaagcccgagcaccaccgtcaacggaggcccacgaaacgcctttggagggtacggccgg
aatttagtgtccgacatcccggatatcgggagccataagatggcatcggttactgctgag
gatgcaccttcctacagtaattacaatacgctgccctgtaggaaatcccactgcctttct
gaaggggccaccaacccacaaattagccatagtaacagcatgcagggcagaagggcgaaa
actactcaggacgtcaatgcaggtgaggggagtgagttcaccgacagtgggatcgaggga
gcagccaccgacaccgacctcctttctagacgctccaatgctaccaactcaagttactcc
ccaccagccagtcgggctttcatcggcagcgacagcgggagcagctcgacgggcgacggg
cttcgccagggtgtgtacgagaacttccgccgggagctggagatgagcaccaccaacagc
gagaacctggaggaggctggctctgccctcagcgacgagcagagcagtggcacccttagc
tccccagggcagtccgacattctcctgacggccgcccagggcacagtacggaaagctggt
gctctggcagtgaaaaacttcctggtgcacaaaaagaacaagaaagtggagtcggccacg
cgcaggaaatggaagcactactgggtttccctgaaaggatgcacgttgtttttttatgag
actgatggcagatctggcattgaccacaacagcatcccgaagcacgctgtctgggtggaa
aacagcatagtgcaagcagtgcctgaacaccccaagaaggactttgtcttctgtctcagc
aactcccttggggacgctttcctctttcagacctctagccagaccgaactggagaactgg
atcacggcaatccattcagcttgtgcaaccgcggtggcaaggcagcatcacaaagaggac
accgtcaagctcctgaaaacagagattaaaaagctggagcagaagattgatatggatgag
aagatgaagaaaatgggtgaaatgcagctgtcctcagtaacagactccaagaagaagaag
accatactggatcaaatcttcgtttgggagcaaaatcttgaacagttccagatggaccta
tttcggtaccgctgttacttggctagtctccaaggaggggagctcccaaaccctaaaaga
ctgcttgcttttgccagccgtccaacgaaagttgcgatgggccgtcttggaatcttttca
gtctcatcgtttcatgcactggtggcagctcgcacaggggagtccggagtgaggagaagg
acgcaggccatgtccagatctgccagtaaacggagaagcaggttttcttctctttggggg
ctggatactacctcgaagaaaaagcaagggaggccaagcattaatcagagggaaaaagaa
gtggcactgagcagtgtccaccagcacaatcctgactgtgatatttgggttcacgagtat
tttacaccgtcttggttctgcctgccgaacaaccagcctgctctgacagtcatccgtcct
ggggacaccacccgagatgtgctggaaattatttgcaagacacaccagctggatcactct
gctcactacctgcgtcttaaattcctgattgaaaaccagatccagttttatgtaccaaag
ccagaagaggatatctatgaactgctgtacaaagaaatagaaatctgtcagaaaattaca
cagcacattcaaatagagaagtctgatgcatcctctgatatttatggtttctctctgtcc
tccgtggaagaagaagggattcgtcggctgtatgtgaacggcgtcaaagagacgggcctg
gctttcaagaaaggcctgaaagctggtgatgaaattgtggagattaacaagaaagctgct
gaggatctggactcagctttgctgaaagatgcccttgttcagccttcgttgtgtcttacc
gtgcgcacctatcctgagatagaggaagggcagaaactaatgcagccaccaccacgtcgc
ttggaaaacccatctgacttgagtgacagtgcactggcatttgctgggagcaaccaaggg
cactcgctttgcggcgacccggacagctctgttgagaccgctccagaggaggcagaagcg
caagacttggagtcatctgatgaggccgataagatgagcaagagtacagagcaggtcgct
gctttctgtcgcagtctgcatgaaatgaacccttctgattcaagtgctcatcctcaggaa
tttacaggaccccagctggccaccatgagacaactcacagacgcagataaactgcgaaag
gttatctgtgaacttctcgagacagaacgcacctatgtcaaagacttaaattgtctaatg
gagagatacctgaagcctctacaaaaagaaacgttcctcacaccagatgagctggatgtt
ctctttgggaatctgactgaaatggtagcattccaggtagagttcttgaaaactctcgaa
gatggagtaaggctggttccagacctggaaaagcttgaaaaagttgagcaatttaagaaa
gtgttgttttccttgggtggatcctttctttactacgcagaccggttcaagctgtacagt
gccttctgtgccagccacacaaaagtccccaaagtactggtgaaagccaagacagacact
gctttcaaggcatttctggatgctcagaatccccgacggcagcactcctccacactggag
tcttacctcatcaaacccatccagcggatactgaaataccctctcctgctgaaggagctc
tttgctctgactgacgtagacagtgaagaacattatcaccttgatgtggccataaaaaca
atgaacaaagttgccagccacattaatgaaatgcagaaaatccatgaagaatatggggca
gtgtttgaccaactcatagcagaacaaacaggggagaaaaaagaggttgcagacctttcg
atgggggacttgctcttgcataatacagtgatatggctgaatcctcctgcttcactgggg
aaatggaagaaggaacctgagctggcagcatttgtgttcaaaactgctgtggtccttgtg
tacaaggatggttccaaacagaagaagaaacttggaggatcacatagagcttcaatttat
gaagactgggatccattccgctttcgccacatgatacctttagaagcattgcaggttcgg
gcgttggcaagtgcagatgcagagaccaattctgtatgtgagattgtacatgttaagtct
gagtctgaaggcaggccagaaagaacgtttcacctttgctgtagttcaccagaacacagg
aaggactttctgaaggcagtacactcaattctgcgggataaacacagaagacagcttctt
aaaaccgaaagtttgccctcatcccagcaatatgttccttttggtggaaaaagattgtgt
gctctaaaaggtgcaaggccagccatgaacagggcagtgtcagccccaagcaagtctctt
gggaggaggaggcggcggctggcccgaaacaggtttaccattgactcagatgccgtctac
acgagcagccctgaaaaagagccccagcagcccacgcacagtggggacactgaccgctgg
gtagaggaacagtttgaccttgctcagtatgaggagcaggaggacatcaaggaaacggac
atcctcagcgatgacgatgagtactgcgaggccatgagaggtgctgtggccgaccgagac
cttcgggagcggctggaggcagcctccatcacgagcagccagccgtaccggggagaccgc
ccgcacccggccatggacacgcacgcctccaggatgacccagctgaagaagcaggcggcc
ttgtccggcatcaacggcgacgtggagggccacggtgaggaggtcatctgggttaggcgt
gaagactttgtccccagcaggaaactgaacacggagctctaa
DBGET
integrated database retrieval system
