Gymnogyps californianus (California condor): 127016542
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Entry
127016542 CDS
T08687
Name
(RefSeq) lysosomal cobalamin transporter ABCD4
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl02010
ABC transporters
gcl04146
Peroxisome
gcl04977
Vitamin digestion and absorption
gcl04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127016542
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127016542
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
127016542
04980 Cobalamin transport and metabolism
127016542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127016542
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gcl02000
]
127016542
Enzymes [BR:
gcl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
127016542
Membrane trafficking [BR:
gcl04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
127016542
Transporters [BR:
gcl02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
127016542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
SbmA_BacA
AAA_7
AAA_22
nSTAND1
DUF6079_1st
nSTAND3
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
127016542
NCBI-ProteinID:
XP_050753055
LinkDB
All DBs
Position
5:complement(45086447..45102241)
Genome browser
AA seq
619 aa
AA seq
DB search
MAGGSAGAGGAGVGGRPGPRLDGLFLRRFLRLQAVLFPGWPSPSALMFLTLLCVALLEQL
VVYQVGVIPSQYYEVLGNKDFSRFKTLTATALTLIVVNSTLKSFNQFICNMMYVSWRKSL
TEYLHSCYFQGQVYYSLHVLREDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLAYYT
YQCFHSTGWLGPVSIFGYFVIGTIVNKVLMSPIVSKLVQQEKLEGDFRFKHMQIRVNAEP
AAFYRAGRVEHMRTDRRLQSLLQTQRELIGMELWLYIGTNTFGYMGSILSYVVIAIPIFS
GVYSDLSPTELSALVSKNAFVSIYLIGCFSQLIDLSSTVTDVAGYTHRIGELQETLLSLG
RKKNNYSEAKASWDLDSSHSGEDPVPLDTAFLLERVTLSVPSSGKLLIKDLSLRISQGNS
VMIVGNTGTGKTSLLRVLGGLWESTQGSIEMLTCFGPRGVVFLPQRPFFTDGSLREQVIY
PLKEIYPVSGSADDERIVRFLELAGLTDLLARAGGLDEQVDWNWYDILSPGEMQRLSFAR
LFYLQPKYAVLDEATSALTEEVEHELYRVCLQLGMTLISVGHRASLEKFHSWILKLHGEG
RWELTRCEKMKRLPAGEAC
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggcagcgccggggcggggggcgccggtgtcggcggccggcctggcccccgg
ctggacgggctgttcctgcggcgcttcctgcggctgcaggctgtgctcttccccgggtgg
ccctccccgagcgccctgatgttcctgacgctgctctgtgtcgccttgctggagcagctg
gttgtttaccaggtcggcgtcatccccagccagtactatgaggtcctagggaacaaggac
ttctccaggttcaaaacactgactgccactgccctgactctgattgtagtgaactccacg
ctaaaaagcttcaaccagtttatctgcaacatgatgtacgtgagctggaggaaatccctc
accgaatacctccacagctgctacttccaaggccaggtctactacagcctgcacgtgcta
cgcgaggacatcgataacccggaccagcgcatcagccaggatgtggagaggttctgcagg
cagctcagctccatggccagcaagctcatcatctcgcccttcacgctggcctactacacg
taccagtgcttccacagcacaggctggctaggcccggtgagcatctttgggtatttcgtc
attggaacgatcgtcaacaaggtattgatgagcccaattgtgtctaaacttgtgcagcag
gaaaaactggagggggatttcaggttcaagcacatgcagattcgtgtcaatgcggaacca
gctgctttctacagggccgggcgagtggagcacatgcgcacggaccggaggctgcagagc
ctgctgcagacccagagggagctgataggcatggagctgtggctatacattgggaccaac
acctttggctacatgggcagcatcctgagctacgtggtcattgccattcccatcttttct
ggggtctacagtgacctcagtccaacagagctcagcgccctcgtcagcaagaatgccttt
gtttccatctacctcatcggctgcttcagccagctcatagatctctccagcaccgtgacc
gatgtagctggctacacgcacaggattggtgaactgcaggagaccttgctgagccttggc
agaaaaaaaaataactactcagaagccaaagccagctgggatttggacagcagccattct
ggtgaggacccagtgccattggacacagctttccttctggagcgagtgacgctctcggtg
ccttcctctggcaagctgctcatcaaggacttgagcctcaggatctcacaaggaaacagt
gtgatgattgtgggcaacactggcacagggaagacatctctcctgagggtccttggggga
ctctgggagagcacgcaggggagcatcgagatgctgacctgctttggcccccggggagtg
gtgttcctgccgcagcggcccttcttcactgacggaagcctgcgtgagcaggtgatctat
cccctgaaggaaatctatccagtttcagggtctgcagatgatgagagaattgtgcgattc
ctggagctggctggactgactgatttgctggcaagggctggaggactggatgagcaggtg
gactggaactggtacgacatcctgtccccaggggagatgcagaggctctcatttgcacgg
ctcttctacctccagccaaaatatgcggtgctagatgaagccaccagcgccctcacagaa
gaggtggagcatgaactgtaccgtgtgtgccttcagctaggcatgacgctgatcagcgtg
ggacacagggccagcctggaaaagtttcacagctggattttgaaacttcacggggaggga
agatgggagctcactcgatgtgagaagatgaagcgactcccagctggggaagcatgctga
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