Gymnogyps californianus (California condor): 127016708
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Entry
127016708 CDS
T08687
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04620
Toll-like receptor signaling pathway
gcl04621
NOD-like receptor signaling pathway
gcl04622
RIG-I-like receptor signaling pathway
gcl05164
Influenza A
gcl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127016708
04621 NOD-like receptor signaling pathway
127016708
04622 RIG-I-like receptor signaling pathway
127016708
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
127016708
05168 Herpes simplex virus 1 infection
127016708
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
MPS2
Sina_ZnF
ATG16
zf-C3HC4_2
FliJ
CEP104_ZnF
Spc29
zf-RING_UBOX
KxDL
Tropomyosin
Med28
zf-RING_6
DUF1664
SPATA24
Crescentin
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
127016708
NCBI-ProteinID:
XP_050753335
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All DBs
Position
5:59613972..59641918
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AA seq
567 aa
AA seq
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MDTSKKTEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLSSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLKTDCQFEELSCPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaagaagacagaaccccctttatctgtagaaatggtgcaacaaagggcc
aatcctgatcgcagtccttcagcatcgatttatgttccagagcaaggtggctacaaagag
aaatttgtaaatgctgtggaagataagtataaatgtgaaaaatgtcacctcatcttatgc
aatcctaaacagactgaatgtggacacagattctgtgagacctgcatgaatgccttgcta
agttcttctagtccaaaatgtacagcgtgtcaagaaagcatagtaaaagataaggtattt
aaagataattgttgcaggagagaactacttgcccttcagatatactgcagaaatgaaaac
aagggctgtaaagaacaactgtctttgggtcaattactgatgcatttgaaaactgattgt
caatttgaagaactctcatgtcctcgtgctgattgcaaagaaaaaatactgagaaaagat
ctgccagaccatgtagagaagacctgtaaataccgggagacaacctgtaaatactgtaaa
agccaagtcccaatgattatgttgcagaaacatgaagatacagactgcccgtgtgtcatg
gtttcatgtcctcataaatgtagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagagaaactgaaagaactggacaaagaaatccgtcccttccga
cagaactgggaggaggctgacagcatgaagagcagcgtagaatccctccagaacagagtg
actgagctggaaagtgttgataaaactgcagggcaaggagctcgaaatacaagcctgcta
gagacacagctgagcagacatgatcagatgctgagtgttcatgatattcggctggctgac
atggacctccgattccaagttttagaaactgccagttacaacggagtattaatttggaaa
attcgagattataaacgtcggaagcaagaggcagtcatggggaagactctgtccttgtac
agccaacccttttatactggatactttggctacaagatgtgtgccagagtctaccttaat
ggagatggcatgggaaaggggacgcacttgtcactgttttttgtcataatgcgtggagaa
tatgatgcgttgcttccttggccatttaaacagaaagtgaccctcatgctaatggatcag
ggaccgtctcgacgccacttaggagatgctttcaagccagatccaaacagcagcagtttc
aagaagccaactggagaaatgaacattgcatctggctgcccagtctttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatctgatctaccagacccctga
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