Gymnogyps californianus (California condor): 127017259
Help
Entry
127017259 CDS
T08687
Name
(RefSeq) TNF receptor-associated factor 6 isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04010
MAPK signaling pathway
gcl04120
Ubiquitin mediated proteolysis
gcl04140
Autophagy - animal
gcl04144
Endocytosis
gcl04620
Toll-like receptor signaling pathway
gcl04621
NOD-like receptor signaling pathway
gcl04622
RIG-I-like receptor signaling pathway
gcl05132
Salmonella infection
gcl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127017259
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127017259
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127017259
04140 Autophagy - animal
127017259
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127017259
04621 NOD-like receptor signaling pathway
127017259
04622 RIG-I-like receptor signaling pathway
127017259
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127017259
09171 Infectious disease: bacterial
05132 Salmonella infection
127017259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gcl04131
]
127017259
04121 Ubiquitin system [BR:
gcl04121
]
127017259
Enzymes [BR:
gcl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127017259
Membrane trafficking [BR:
gcl04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
127017259
Ubiquitin system [BR:
gcl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
127017259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF6_Z2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF_2
Sina_ZnF
zf-RING_5
SlyX
Med21
PspA_IM30
RING_XB3-XBAT31
TRAF3_RING
zf-RING_11
DUF4455
CENP-F_leu_zip
HAP1_N
CEP104_ZnF
zf-C2HC_3
U-box
UPF0242
Spc29
ATG16
DUF1664
DM
DUF16
DUF2730
PUMA_CC
HMMR_N
ADIP
Motif
Other DBs
NCBI-GeneID:
127017259
NCBI-ProteinID:
XP_050754199
LinkDB
All DBs
Position
5:complement(22546541..22558198)
Genome browser
AA seq
545 aa
AA seq
DB search
MSLLYSDNSCGARDVESGCCAAMASACSVGAKEDSVSVSSGTGNPPSSFTEETQGYDVEF
DPPLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPD
NFAKREILSLMVKCPNKGCSMKMELRHLEDHQLQCDFSTVECPQCQGAFQKNRLKEHMTQ
ECPRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPV
PCFYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTATNPVPFINGLPFEPAL
FSHVSHATYDCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNL
EGKITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQL
PNAQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELL
AFQRPTIHRNPKGFGYVTFMHLQTLKQRTFIKDDTLLVRCEVLTRLDLNSLRREGFQARS
TDGAM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctatatagtgataacagttgtggagctcgagacgtggaaagtggctgttgt
gcagccatggccagtgcctgcagcgttggagcgaaagaagacagcgtaagcgtcagcagt
gggactggaaaccctccaagttctttcacagaggaaacacaaggatatgatgtggagttt
gatccacccttggaaagtaaatatgaatgtccaatctgtttgatggctcttcgggaagca
gtgcagacaccatgtggacaccgtttctgcaaaggctgcattgtcaaatcaataagagat
gcaggtcacaaatgtccagtagacaatgaaattctgctcgaaaatcaactttttcctgac
aacttcgctaaacgggaaatcctttcattaatggttaagtgtcccaacaagggctgcagt
atgaagatggagctgaggcatttggaggaccaccagctgcagtgtgatttttccactgtg
gaatgcccacagtgccaaggagccttccagaagaaccgtctgaaagagcacatgacacag
gagtgtccgaggcgtcaagtctgttgtccaaactgtgccacatctatggcctatgaagat
aaagagcttcatgaccaaacttgcccactcgccaatgtattttgtgaatattgcaacaca
gtactcatcagagagcagatgcctaaccattatgacaatgattgtcctactgcccctgtg
ccatgtttttacagtgcctttgggtgtcctgaaaagatgcaaaggaatgaactggcacga
catatgcaggagttcactcaggttcacatgagaatgatggctcagagttttcaaaatatc
agtgttactgctacaaatcctgtacccttcatcaatggcctaccctttgagcctgccctc
ttctcacatgtgtcacatgccacatatgattgtaatccagaagttgaaaacttcaaagaa
actattcagcagttggaaggtcgtctggtaagacaagatcaccaaatcagagaactcatt
gctaaaatggagactcagaacactcacatggcagaactcaaacgtactatccgaaatttg
gagggaaagattactgaaatggaggcacagcaatgtaatggtatttatatctggaagatt
gagaacttcagtggacttcagaaagcccaggaagaagagagacctgttgtgatgcacagt
cctggcttctatactggaaagcctggctacaagctgtgtttgcgtctgcatatccaatta
ccaaatgctcagcgttgtgctaattttatatctctgtttgtccacactatgcaaggagaa
tatgacagccatctgccttggcctttccaaggcactatacgactttctattttggatcaa
tcagaaggccctgaaaggcagaatcatgaagaagtaatggaagccaagccagagttacta
gccttccagagaccaacaattcaccgcaacccaaaaggttttggttatgtgactttcatg
cacctgcaaaccttgaaacaaagaaccttcataaaggatgatacccttctggtgcgctgt
gaagttctaacgcgtctagatttaaacagtctccgcagagaaggatttcaagctcgcagt
actgatggagctatgtag
DBGET
integrated database retrieval system
