Gymnogyps californianus (California condor): 127017583
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Entry
127017583 CDS
T08687
Name
(RefSeq) protocadherin-15 isoform X1
KO
K16500
protocadherin-15
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gcl03037
]
127017583
04515 Cell adhesion molecules [BR:
gcl04515
]
127017583
Cilium and associated proteins [BR:
gcl03037
]
Primary cilia and associated proteins
USH complex and associated proteins
127017583
Cell adhesion molecules [BR:
gcl04515
]
Cadherins
Protocadherins
127017583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
PCDH15_12th
ECD
Cadherin_FAT4_N
Cadherin_CELSR2_9th
RET_CLD1
Fibulin_C
SelP_N
Motif
Other DBs
NCBI-GeneID:
127017583
NCBI-ProteinID:
XP_050754686
LinkDB
All DBs
Position
6:40061338..40480632
Genome browser
AA seq
2064 aa
AA seq
DB search
MLQRFCLWERLAVGIAVATILAGCLAQNDEDWQYEDCKLARTGPPATIVPIDEESRNGTI
LVDNMLIKGTAGGPDPTIELSLKDNVDYWVILDPISQMLYLNSTGRILDRDPPMSIQSIV
VQVQCVNKKVGTIINHEVRIVVRDRNDNSPRFQQQRYYVAVNELTPVGTTIFTGFSGNNG
ATDIDDGPNGQIEYVIQYNPNDKTSNRTFDIPLTLSGAVVLRERLNYEEKTRYFVIVQAN
DRAQNLNERRTSTTTLTVDVLDGDDLGPMFLPCVLVNNTRDCRPLTYQASLPELTDPARV
NPISVTPPIQAIDQDRNIQPPSDRPGILYSILVGTPEDYPQYFHMNLTTAVLTLLKPINR
DLHQKFDLVIKAEQDNGHPLPAFANLHIEVLDENNQKPYFTRSTYEGFILESSPVGTTIS
DNQNLTSPLQIVVLDNDVEETKDPQLHLFLNDYNTFFTVTQSGITRYLTLLQPVDREVQQ
LYTFSMTASDGVQESVPVTVNILVIDANDNSPTFSNISYNVKIYTDMRPGEGVIKLTAVD
ADEGPNGQIVYEILAGDQGDFIINDRTGLITIAPGVVLSVGRSYALTVKASDSAPPAQRR
SSITTVYIEVLPPNNQSPPRFPQLMYSLEVSEAMRIGAILLNLQAFDREGDPIRYLIQNG
DPQQVFNLSQSSGLLALGKPLDRESTDRYILIVTASDGRPDGTSTATVNIVVTDVNDNGP
VFDMFLPKNLSVQEEEANAFVGQVRATDPDAGVNGQVHYSLANFNNLFRITSNGSIYTAV
KLNREVRDYYELIVEATDGAVDPRRSTLTVAIKVLDIDDNSPVFTNASYTVCVPENLPPG
TVFLQIEAKDIDLGSDVNYRIRTQEALQYFALNKYTGELSLLKSLDYESFSDTEATFTFL
VEAFDSKGTMPPGLATVTVRVKDMNDYSPVFSKKLYRGMVAPDAVKGTVITTVSAEDQDP
PGTPASRVRYKVDVAQFPYSASIFDVDENSGRVVTRVNLNEEPSTVFKLVVIAYDDGDPV
KFNTTTVEIAVLQPSVIPRFTQDEYRPPPVSESAPKGTVVTVVTAAALNQTIVYSIVSGN
EEDVFAINNRTGVISVKKSLDYESVESYELRVQADSLQVVRSNLRVPSKSNTAKVFIEVK
DENDHVPVFTKKMYIGGVSEDAKMFSSVLKVKADDKDTGNYSAMQYRLIIPPIKDGKEGF
VIEAYTGLIKTAMLFKNMRRSYFKFQVIATDNYGKGLSSKAEVLVSVVNQLDMQVIVSNV
PPTLVEQNKDQLIGILERYVQDQIPGATVVVESIGARRFGDGYSEEDYTKSDLMVYAIDP
QTNRAIMRNELFKFLDGKLLDINKEFQPYLGQGGRILEIRTPDVVANVKKQAQAVGYTEG
ALLALAVIIILCCMPAILIVMVSYRQFKERQAECAKTARIQMALPAGKPASTAANNLYEE
LGDSTMRGYAQQEQQQLLRPSLLRPEELSMESGIDPGQEYYGQDYYSYEHGYELPQYGSR
RRLLSPSGMYDEYGEVVVENDGGYYYSPHGSTAEEGMSQGRGPSSRGISQRAGPQIEGRP
LGDRMDLRHGSGRAYRTSQGKRKLKAVMHLSRIAVSAHKPVGRTESARSPWKKARIFPMI
LQKVKGSRKDSSYAKLMSARQVDGEKSMIIRGSYFQKSTDDRPSMRKLNHVLKRISVSRK
FQEPISKDAVRARGKGEEEYEGDEGKSGVSINITAESEHEDSDYEKKKKKRRKYTSDESS
VKSSSSGSESEDKDYLKVTLDQDEATESTVDSDEETGRDFGDSDDDSGSSSSSESEEDSS
EEDDDEEDSDSDEDGSLSKSSSTRSSYSKSGTSESSSRRSTERSSIKSRGGSSRGRARQS
SQKSNISSNASGSDRDMSYRKTSGSSYKSKTSSASLEIEDTIEEVSEEDEQADVEQVSAS
PDETADNSNKAVSETSAKAKTVATEEDKRGKSAINGEDSVGESTEEVDTDASDREETISK
NESSCLESEISVTSKGTEGTKSTASATSGKTATSPDTENQSSDTNVSRKKIRKKMSQENS
QSQSDETLDTAVTESETTGDSTSF
NT seq
6195 nt
NT seq
+upstream
nt +downstream
nt
atgttacagcggttttgtctctgggaacggttagctgtagggattgcagttgctactatc
ttagcaggttgtttggcccagaatgatgaagactggcaatatgaggattgcaaattggcc
agaacaggtcctccagccacaatagttcctattgatgaagaaagtcggaacggcactatc
ctggttgacaatatgctgatcaaagggacagcaggagggccggaccccaccattgaactc
tccttaaaggacaacgttgattactgggtgatcctcgatcctatcagccagatgttatac
ctaaatagcactggccgaattctggacagagatccgccaatgtccattcaatccattgtg
gtgcaagtccagtgtgttaacaagaaggttggcaccattatcaaccatgaagtgcggatt
gtggtgagagacaggaatgataactcgcctcggttccagcagcagcggtactatgtggca
gtaaacgagttaactccagttggaacaaccatctttacaggattttctggaaacaatggt
gctactgatattgatgatggtccaaatggccagatagaatatgtcatccagtacaatcct
aatgacaagacttccaacaggacctttgatattcctctcactttgtctggagcagtagtt
ctacgggaaagactaaattatgaagaaaagactcgttattttgtcattgttcaagcaaat
gaccgagcccaaaatcttaatgagcgaaggacaagtacaaccaccctgacagtagacgtg
ctcgatggggacgatttgggaccaatgtttcttccttgtgtcttggtgaataatactcgt
gactgtagacctctcacctaccaagcgagcttgccagaactgactgatcctgcacgtgtg
aatcccatcagtgtcactccacccatacaagccatagatcaggaccgaaacatccagcct
ccttctgatcgaccgggcatcctctattccatcctagttggtactcctgaggattatcca
cagtatttccatatgaatctcacaacagctgtactgacactcctaaagccaataaatagg
gatttacaccagaagtttgacttggttattaaggctgaacaagacaacggccatcctctt
cctgcctttgccaatctgcatattgaagtccttgatgagaacaatcagaagccttacttc
acaagatctacgtatgagggcttcatccttgaatcctccccagtgggaacgaccatctct
gataaccagaatctgacttctccgctacaaattgtagtgttggacaacgatgtggaggag
accaaggatccccagctccatctctttctgaatgattacaatacgtttttcactgtgact
cagagtggcatcacccgctacctcaccctgctgcagcctgttgacagagaagtccagcag
ctttacaccttctcgatgacagcttctgatggtgtacaggagagtgtcccagtgacagtc
aatatcttggtgattgatgcaaatgataattccccaaccttctccaatatatcatacaat
gtcaagatttatacagatatgaggcctggggaaggcgttataaagctcaccgctgtagat
gcggacgagggacccaatggacagatagtatatgaaattttggctggggatcagggagac
ttcatcatcaatgaccgaacaggccttatcaccattgctccaggagttgtattgtcagtg
gggcgatcctatgctctcactgtcaaagcatctgatagcgctcctcctgcgcagagaagg
agctctattactactgtttacattgaggtccttccacccaacaaccagagccctccccgc
tttccccagctgatgtacagccttgaagtcagtgaggccatgagaattggagccattttg
ttaaacctgcaggcttttgatagagagggtgaccctataagatacctcattcagaatgga
gatcctcaacaagtttttaatctctctcaaagttctggactgctagccttaggaaagccc
ttggacagagaaagcactgatcgctatattctgattgttacagcctcggatggcagaccc
gatgggacctcaactgctactgttaatatagtggtgacggatgtgaatgacaacggacca
gtttttgatatgtttctacctaaaaacctgtctgtacaggaagaggaagccaatgctttt
gttggtcaagtaagggctacagacccagatgctggtgttaatggtcaagttcattacagt
ttggcaaacttcaacaatcttttccggatcacatcaaatggtagcatttatacagcagtt
aaactgaacagagaagtaagggactattatgaacttattgttgaagcaacagacggagct
gtggacccccgccgttcaacactaactgtagcgatcaaggtgctggatattgatgacaac
agccctgtttttactaatgcttcctacactgtctgcgtgccagaaaatctaccaccaggc
actgtcttcctgcaaatagaggcaaaggatattgatcttggttctgatgttaactatcga
atacggacacaggaagcactacagtattttgcactgaacaaatacacaggcgagttatca
cttttgaagtccttggattatgaatcattctctgacacagaagcaaccttcacctttctt
gtggaagccttcgatagcaagggcactatgcctcctggtctcgctactgtcacagtgaga
gtaaaggatatgaatgattactctccagtatttagcaaaaagctctacaggggaatggtt
gctcctgatgcagtcaagggcaccgttatcactactgtttcagctgaggatcaagatcct
ccgggcacaccagcaagtcgagtccgatacaaagtagatgttgcccagtttccttacagc
gccagcatttttgatgtggacgaaaactcaggacgtgtagtaacccgagtaaacctaaat
gaagagccaagtacagtgttcaagctagtggtcattgcgtatgatgatggggatcctgtg
aagttcaacaccactaccgtagaaattgctgtactgcagccttcagtaattccacggttt
acgcaggatgaatacagacccccgccagtgagtgaaagtgcaccgaaaggaactgtggtc
acagttgttacagcggccgccttgaaccagacaattgtatattcaattgtgtcaggaaat
gaagaggatgtgtttgctattaataacagaacaggcgtgatctcagttaaaaagtctctg
gattatgaaagtgtggaaagttatgagcttcgagttcaagcagactccttacaagtggta
cgatccaatctgcgtgtcccttccaaaagtaatacagccaaggtatttattgaagtaaag
gatgaaaatgaccatgtgcctgtctttaccaaaaaaatgtacattggaggagtgtctgaa
gatgccaaaatgttctcttctgtgcttaaagttaaggctgatgataaagacactgggaat
tacagtgccatgcaatacagactcatcattcctccaatcaaggatggtaaagaaggtttt
gtgattgaagcttacacagggctaataaaaactgctatgctgttcaaaaatatgagaaga
tcctatttcaagtttcaggtcattgcaactgacaattatggaaaaggactgagcagcaaa
gcagaagtacttgtctctgtggtcaatcagttggatatgcaagtcatcgtctctaatgtt
cctcccacccttgtggaacaaaacaaagatcaactcatagggattttggaacgctatgtc
caagatcagattcccggtgcgacagtcgtggtggaatccatcggtgcgcggaggtttggg
gatgggtactctgaagaggattacaccaagtctgacctcatggtctacgcaattgacccg
cagacgaatagagctataatgaggaacgaactttttaagttcctggatggcaaactgctg
gatatcaataaagagtttcagccgtacctggggcaggggggacgcatcctggagatccgc
actccagacgtggtagcgaacgtcaagaagcaggcgcaagccgtaggctacacggaaggc
gcgttacttgctctggccgtcatcatcatcctgtgctgtatgccagctattttaatagtt
atggtcagctacagacaattcaaagagcggcaggctgaatgcgcaaagactgcgagaatc
cagatggctttaccagcaggcaaaccagcaagcaccgctgccaataacctctatgaagag
cttggcgacagcaccatgcgaggatatgcacagcaagagcaacagcagttgctgagacct
tctcttctcagaccagaggagttaagtatggagtctggaattgacccagggcaggagtac
tatgggcaagattactacagttatgagcatgggtatgagctgcctcagtatgggagccgc
cgccgattgctctctccttcggggatgtacgatgagtatggggaagtcgtggtggagaat
gatggtggctactactatagtccgcatggatcgacagcagaagaggggatgagtcaaggc
agaggtccttcaagcagaggtataagccagagagcagggcctcaaatagaaggtagacct
ttaggtgataggatggatctaagacatggttctggaagagcatataggaccagccaggga
aaaaggaaactaaaagcagtgatgcatttaagtcgcatagcagtcagtgctcacaaacca
gtaggaagaactgagtctgctcgttctccatggaagaaagcaaggatcttcccgatgatt
ctgcagaaagtgaaaggcagtaggaaagattccagttatgccaagttgatgtcagctcgc
caagtggacggtgagaaaagcatgattatcaggggaagttacttccagaaatcgacagat
gacagaccttcgatgagaaaactaaatcatgtgttaaaacgcattagtgtctccagaaaa
tttcaagagcctattagcaaagatgcagtgcgtgcaagaggaaaaggagaggaagaatat
gaaggagatgaaggcaaatcaggagtttcaataaatatcacagcggagagtgaacacgag
gatagtgattatgagaagaagaaaaagaagagaagaaaatacacttcggatgaatcatcc
gtgaagagtagtagctctggctcggagtcagaagacaaagactacttgaaagtaactctg
gaccaagatgaagccactgaaagtactgtggactcggatgaagaaactgggcgcgatttt
ggggattctgatgacgactctggatccagctctagcagtgaatcggaggaggactcatct
gaagaggacgatgatgaggaagactctgacagtgatgaagatggtagcctgtcaaagagc
tcatctacacgaagttcatacagcaaatcagggactagtgagtccagtagtagaagaagc
actgaaaggtccagtataaaaagtaggggaggtagctctcgtggcagagcgaggcaatcc
agccagaaatcaaatattagctctaatgcatcaggtagtgacagggacatgagctacagg
aaaacttcaggatccagctataagagcaaaacctcctccgccagccttgaaatagaagac
acgatagaagaggtgtcagaagaagatgaacaagcggatgtggagcaagtcagcgcaagc
cccgatgagacggcagataactcaaataaggcagtttctgaaacatctgccaaggcaaaa
actgttgctactgaagaagacaagagaggaaaatcagctattaatggtgaggatagcgtg
ggtgaaagcacggaagaggttgatacagatgctagtgacagggaggaaactatcagtaag
aatgaatcttcttgcctagaaagtgaaatcagtgttacttccaaaggtactgaagggaca
aaaagcacagcgagcgccacttctggtaaaactgccacttcccctgatactgagaatcaa
agttctgacaccaacgtgagcagaaagaaaataagaaaaaagatgtcccaggaaaacagt
cagtctcagtcagatgagaccctggatactgccgttacggagtcagagactactggtgat
tctacatccttttaa
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integrated database retrieval system
