Gymnogyps californianus (California condor): 127019578
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Entry
127019578 CDS
T08687
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gcl01009
]
127019578
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gcl04040
]
127019578
Protein phosphatases and associated proteins [BR:
gcl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127019578
Ion channels [BR:
gcl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127019578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
DUF1340
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
127019578
NCBI-ProteinID:
XP_050757651
LinkDB
All DBs
Position
9:complement(21398047..21476797)
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AA seq
989 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAEAELSAEEKAYLSAVEKGDYASVKHALQEAEIYYN
ININCMDPLGRSALLIAIENENLEIMELLLSHSVYVGDALLYAIRKEVVGAVELLLNYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWAVKLLTCVTIGLLFPVLSVAYLIAPKSRLGLFI
KKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHMQGPPPTIVEWMILPWVLGFIWGEIK
EMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIVPSPKSVWYLCKWIHNQLCPGNDSDNEQKRHENLKTFTERHADNLIQNQHYQEVIRN
LVKRYVAAMIRTSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSYSTSSTEVS
QKDETNEDGAGEKSKAKSVSFNVANKKKDFNVSALIKTMSGINMVEEKPKSNGISKRSFV
RNGNRVQRLSSSKKESFKRLGLLFSKMNGHVPEPNSEPMYTISDGIIQPHYMWKDIKYSQ
IDKEKEENCSKSEINLNEVNYSGNTRLTGQSKECPVVCTSSLHCASSICSSNSKLIDSSE
DVFDSWGEACDLFINQWKDGQEDHVTTRL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctatactacaaaaaggtaaactattcaccgtacagagatcggatcccatta
cagatcgtgcgagcggaggcagagctctcggcggaagagaaggcctacctcagtgccgtg
gagaagggggactatgccagtgtgaaacatgccttgcaagaggcagagatctactacaac
atcaacattaactgtatggatcctcttggtcgcagtgcccttttaatagccatagagaat
gaaaatctggagatcatggagttgcttttgagccacagtgtgtatgtgggagatgctctg
ctgtatgcaatacggaaagaggtggtgggagctgtggagctactgctgaattacaggaag
ccgagtggtgaaaaacaggttccgaccttgatgatggacacccagttttcagaattcact
ccagatatcaccccaataatgctggcggctcacaccaacaactatgaaatcatcaaactg
cttgtccaaagacgggtaacaattccacgcccacaccagatcagatgcaattgtgtggaa
tgtgtctccagttcggaggtggacagcctaaggcattccaggtcaaggctgaacatctac
aaagccttagccagcccttcgttgattgccttatcaagcgaggaccccatcttgacggcc
ttccgactgggctgggagctgaaggaactcagcaaagtggaaaatgagttcaaggctgaa
tatgaagagctttcacagcagtgtaagcgttttgctaaggaccttttggatcaggcacgg
agttcccgagaattggagatcattctcaatcacagagatgatcaaagcgaagagctggat
ccccaaaaatgtcatgatttggcaaagctaaaggtagcaataaagtatcaccagaaagag
tttgttgctcagccaaactgccagcagctactagcaacactttggtatgacggttttcca
ggatggaggcggaaacactgggcagtaaaactcttgacctgtgtcaccattggactgcta
tttcccgtgctatccgtggcatatctgattgcaccgaagagcaggctgggactgttcatt
aaaaagccatttataaagtttatctgccacaccggctcttacctaaccttcctcttcatg
ctcctgctggcatcacagcacatcgtcaggactgaccttcacatgcagggaccacctccc
accatcgtggagtggatgatcctgccctgggttctaggctttatctggggagaaatcaag
gaaatgtgggatggtggattcaatgagtacgtacatgactggtggaatctgatggatttt
gcaatgaactccctctatcttgcaactatctcccttaaaattgttgcctacgtcaagtat
aacggttctcgtccaagggaggaatgggaaatgtggcatccgactctcattgcagaagcc
ctctttgcaatatccaacattttaagttccttgcgtctcatatccctgtttacagcaaat
tcacacctgggacccttgcagatttctctgggacgcatgctgctagacatccttaaattc
ctttttatctactgtctggtgcttctggcttttgccaatggactgaaccagctttatttt
tattatgagaccagtgcctcggaggaacccaacaactgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacacttttcgagaccctccagtcactcttctggtctgtgttc
ggtctgctgaatctctacgtcaccaacgtgaaagccagacatgagttcacagaatttgtt
ggggccactatgtttgggacctacaatgtcatctcccttgttgtgctgctgaacatgctc
atagccatgatgaacaactcctaccagctcattgccgaccatgcggatattgagtggaag
tttgcacggacgaagctctggatgagttactttgatgaaggtgccactctgccccctcct
tttaacattgtcccaagtcccaagtcagtctggtacctttgcaagtggattcacaatcag
ctgtgcccaggcaacgactctgacaatgaacagaagaggcatgaaaacctcaaaacattc
acagaacggcacgctgacaacctgattcagaatcaacattaccaggaagtgataagaaat
cttgtgaaaagatatgtcgcagcaatgataagaacttccaaaaccaacgaaggtttaact
gaagaaaacttcaaggaattaaaacaggacatctcaagttttcgctatgaagttcttgac
ctcttaggaaataggaagccccagaggagaagttattctaccagcagcacagaggtgtcc
caaaaggatgaaacaaatgaggacggtgctggagaaaaatccaaagccaagagcgtgtct
ttcaatgtagccaacaaaaaaaaggacttcaacgtatctgctctaattaaaactatgtct
gggatcaatatggtggaagagaagccaaaaagcaatgggatcagtaagcgctcctttgtc
cgaaatggaaatcgagttcagagactttccagctccaagaaggagtcctttaagagactg
ggcctgcttttctccaagatgaatggacacgtacctgaaccaaattcagaacccatgtac
actatttcagacggaattattcagccacactacatgtggaaagacattaaatattctcag
attgataaagagaaagaagagaattgttccaaaagtgaaattaacctcaatgaggtgaac
tacagcgggaacacaagacttacaggacagagcaaggagtgccctgtggtttgtaccagc
tcccttcactgtgcttccagtatttgttcctctaattccaaacttatagactcgtcagag
gatgtgtttgattcatggggagaggcttgtgacttgtttataaaccagtggaaagacggg
caggaggatcacgttacaactcggctataa
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