Gymnogyps californianus (California condor): 127023695
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Entry
127023695 CDS
T08687
Name
(RefSeq) TNF receptor-associated factor 2
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04010
MAPK signaling pathway
gcl04137
Mitophagy - animal
gcl04141
Protein processing in endoplasmic reticulum
gcl04210
Apoptosis
gcl04217
Necroptosis
gcl04621
NOD-like receptor signaling pathway
gcl04622
RIG-I-like receptor signaling pathway
gcl04920
Adipocytokine signaling pathway
gcl05132
Salmonella infection
gcl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127023695
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127023695
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
127023695
09143 Cell growth and death
04210 Apoptosis
127023695
04217 Necroptosis
127023695
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127023695
04622 RIG-I-like receptor signaling pathway
127023695
09152 Endocrine system
04920 Adipocytokine signaling pathway
127023695
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127023695
09171 Infectious disease: bacterial
05132 Salmonella infection
127023695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gcl03019
]
127023695
04121 Ubiquitin system [BR:
gcl04121
]
127023695
Enzymes [BR:
gcl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127023695
Messenger RNA biogenesis [BR:
gcl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
127023695
Ubiquitin system [BR:
gcl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
127023695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
Sina_ZnF
zf-C3HC4_2
zf-C3HC4_4
zf-RING_6
zf_C2HC_14
zf-TRAF_2
zf-RING_10
zf-C3HC4_5
DUF5918
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
127023695
NCBI-ProteinID:
XP_050763919
LinkDB
All DBs
Position
18:complement(435153..459145)
Genome browser
AA seq
472 aa
AA seq
DB search
MAAANSTPPGSLDLNQPGFAKEILGTKLEVKYLCSDCKNILRRPFQAQCGHRYCSYCLKK
IISAGPQKCASCIQEGIYEEGISILETSSAFPDNAARREVESLPAVCINSGCTWKGTIKE
YEAHDEVCPEFPLTCEGCGKKIPREKFRDHVKTCGRSKVPCRFEVVGCAEVVENEKLLEH
EAKCLVEHLYMLLSFVVSLKAGSGDLKALPALSSSQNNSPLLAANSLCSESELSRSLELL
GRCEALERKTVTFENIVCVLNREVERVSLTAEAYSRQHRLDQEKIETLSNKVRQLERSIG
LKDLAMAEMEEKIRNMEASTYDGVFIWKITEFARKRQEAITGRSPAIFSPAFYTSKYGYK
MCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHIIDAFRP
DVTSSSFQRPITEMNIASGCPLFCPVSVMEAKNSYVRDDAIFIKAIVDLTGL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcaaactctactccacctggctctttggatctaaaccagcctggatttgca
aaggagatcctgggaactaaactggaggtcaaatacctctgctccgattgcaagaatata
ttaaggaggccgtttcaagctcagtgtggacatcgctactgttcctattgtctgaagaag
attataagtgctggacctcaaaagtgtgccagctgtattcaggaaggaatatacgaagaa
ggaatttctattttggaaacaagctcggctttcccagacaacgcagctcgtcgggaggtg
gaaagtctgcctgctgtctgtattaacagtggctgcacttggaaggggactattaaagaa
tacgaggctcacgacgaagtctgtcctgaattcccactgacttgcgaaggctgtgggaag
aagattccaagggagaagtttcgggaccatgtgaagacttgtggcagatctaaagtgcct
tgcagatttgaggttgttggatgtgctgaggtggtggaaaatgaaaagctactagaacat
gaagcgaagtgtttggtggagcatctctacatgctactgagttttgtggtcagcctcaag
gctgggtctggagacctaaaggcccttcctgccctttcctcatcacaaaacaactcccca
ctactggcagcaaactctctgtgctcggagtcagagctctccaggtccctggagctcttg
ggaagatgtgaggcccttgagaggaaaacagtgacctttgagaacattgtctgcgtgctc
aaccgggaggtggaaagagtgtctctaacagccgaagcctacagtcggcaacatcgacta
gaccaggagaaaatcgaaacactgagtaacaaggtccggcagctggaaaggagcattggg
ctcaaagatctggccatggctgagatggaggaaaagatccgcaacatggaagcttccacc
tacgatggtgttttcatctggaagataacagaatttgccaggaagcgtcaggaggcgata
acaggccgctctcctgcgatcttctctccagctttctacaccagcaagtatggctacaag
atgtgtctgcgtgtttacctgaacggggacggcaccgggcgtgggacccatctgtccctg
ttctttgtggtgatgaaaggacccaacgacgcgcttctgcggtggcccttcaaccagaag
gtaaccctgatgctcctggatcagaacaaccgggagcacatcatcgatgccttccgaccc
gacgtgacatcctcctccttccaacgacccatcacggaaatgaacattgccagcggctgc
ccgctgttctgccccgtctccgtgatggaagccaagaactcctacgtgcgtgatgacgcc
atctttattaaagccatcgttgatctcacgggcctctaa
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