Gymnogyps californianus (California condor): 127026385
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Entry
127026385 CDS
T08687
Name
(RefSeq) breast cancer type 1 susceptibility protein isoform X1
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03440
Homologous recombination
gcl03460
Fanconi anemia pathway
gcl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127026385
09124 Replication and repair
03440 Homologous recombination
127026385
03460 Fanconi anemia pathway
127026385
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gcl01009
]
127026385
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gcl04121
]
127026385
03036 Chromosome and associated proteins [BR:
gcl03036
]
127026385
03400 DNA repair and recombination proteins [BR:
gcl03400
]
127026385
Enzymes [BR:
gcl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127026385
Protein phosphatases and associated proteins [BR:
gcl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127026385
Ubiquitin system [BR:
gcl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127026385
Multi subunit type E3
BRCC complex
127026385
Chromosome and associated proteins [BR:
gcl03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
127026385
DNA repair and recombination proteins [BR:
gcl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
127026385
BRCA1-A complex
127026385
BRCA1-B complex
127026385
BRCA1-C complex
127026385
BRCA complex
127026385
FA (Fanconi anemia) pathway
Downstream FA components
127026385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
BRCT_2
BRCT_3
zf-C3HC4_3
zf-RING_6
RING_XB3-XBAT31
zf-Nse
zf-RING_5
zf-RING_10
RTT107_BRCT_5
zf-ANAPC11
Zf_2nd_IFT121
Motif
Other DBs
NCBI-GeneID:
127026385
NCBI-ProteinID:
XP_050767556
LinkDB
All DBs
Position
28:complement(7572318..7598630)
Genome browser
AA seq
1866 aa
AA seq
DB search
MDLSVIAIGDVQNVLSAMQKNLECPICLDVVQEPVSTKCDHIFCRFCMFKLLSKKKKGVI
QCPLCKTEVTKRSLKENSRFKQLIEGLLETIHAFELDSGVKFLDSRHFPKTSTEATAAEF
LCKESSVIQSKGFRNRKKSAKENGQENSTLQEANVDTQLTDTRVKRCPLRNKTQKCDSEK
GIYIEFGSDSSEELFKQASNAGLEDKEALQISSQEKLEELKSAEKGNKYSCNTQPDKLGA
KEIVLPSVIGESDFSKEGLSKKSTRSITEYAKPGQVNMTEYRSSPLNVLAVDLLTEQCDR
IGNASPLRNGDTSFFKNTEEMDAEQTQCNSKSKEFDLKDSSESKLDKAKEIDIVVQSVEA
VEMYEPENDSSHEKEIPLEKLLQPETLHCATLNQVSRKRLKRSIQKVNEWFSKSNEILSS
NSSQDDSAGATDVSGEGDTCLSDKDSCISEKTDPMVDSMENAVVEGNKRWSKQTADSIKD
KIFGKTYKRERKANPPIILRDILPTTKKEDVAADEKCLNNSSKDGLKRKRKTARVLQPED
FIKKKDIEEADGCPQSVNWSLGDAEKKRSDESSAVNESYLSENREDNTLAELEEGGSIWK
KATEKVTHKHCDGELELNNCDQKSTKKRSSAAKRCRRSTRTMCALQLVVDRHSVSPDPAE
PQIDSYPSSEEPRKVDSEQRQVRRSRRLQLLSEEMIEETGKGVAIKGARKYDSDHDGSFF
GLQRNVLVHASECKDLCEPQGTLGYKPLTNLKGGDLEANEIQISLKNLSDTAETGKSLFD
PTSSCQHSNCSSFAPDAGSQEGEILGSPFLVQAPSVAVVQTASHSTEEMTESRTTFPQDS
GHDTQNIPGDFRTEKLPMAKNVSELTKEAEDSELDTQYLRNIFRHSKRLSFSLYPTPMKA
CAVEDAASETLKIPCAAKVENKHSKYLKTEDLQEEKTTAESLSRVCEKETLKTYESACVS
PVTCFVGNTECMHTGEHKEYVSQVANQGNLTPVRMGTARTKDKNRLQKGEWGNEKTVSTD
TGIESELRQNPIKSNRSQSDQSNTEEHIFKRTDLNTVDEICFSAESNQAGKAKVVDGKGP
ILHFQSRSMICPATCQQRPAEFSCEVIGKKSKRERKQVKGNEEQATQTVSTGMPECLLTE
ALEEPLKGNSDFIGLSETPDGLLCSDDDIEENTSFSETDRRERSAVFVKRSDNALVKELH
NRHANSKPRSQGIQRSRRRAQKLQSSDEESSEDEDLPCFQTLIFGKSVSTPLQINKQVTS
VVESSVSPITLPHNGSHDDNNMQKMPEAALSNECGSPSQESECSVNLFSSQSNVSEESVD
GAQELKKPLIQVHTSKQVSNVNESKETFQSFNGGLKRNKTNFKDECQEDPNMGANLGEAS
GYDSETSNVEDSCGPFSQGEILTTQQKNAMQNNLKKLQQEMAVLEAVLKQHGSQDCEFVP
IHRELPHSSSEGTLGVEQMRQERGAESTSEGSFENHKCSISKGFSANDFHVMPSDSLNSK
IKELEKERSPELLLPSSKSCLFKRPDLEKGLQCDSVLKNKAPSEKTKPVQEAVQEYSQCQ
LEAENADEQKSGTRLNSASVLSNLSGNVTRSPNNASSSVRLLNPRTAEATNSSVVAQNAN
KSCAQECKSKRSVCFPISVLHNAAGKENATSPVATNRKEMSIVASGLNQSEHLVVQKFAR
KTQSTLSNHITEGTTHVIMKTDKDLVCERTLKYFLGIAGRKWVVSYQWVIQSFKEGRILD
EENFEVRGDVINGRNHQGPKRARQSLTEKIFKDFEICCYGPFTDMTTEHLEWMVELCGAS
VVKQLHLFTHTTNSTAVMVVQPDAWVENMDYRAIQQKNNVAMVTREWVLDSVACYECQEF
DAYLVS
NT seq
5601 nt
NT seq
+upstream
nt +downstream
nt
atggacttgtcagtgattgctattggagatgtacaaaatgtgctttcagctatgcagaag
aacttggagtgcccaatatgcttggatgtggtacaagagccagtttcaacaaaatgtgat
cacatattctgcaggttctgcatgttcaaactcctcagcaaaaagaaaaaaggtgtgata
cagtgtcctctgtgtaagactgaagttaccaagagaagtctgaaagaaaattccagattt
aagcaactaattgaaggattgttggaaactatccatgcgtttgagcttgacagtggagta
aagtttttagacagtcgtcactttcctaaaacatccacagaagccactgctgctgagttc
ctgtgtaaagaaagttctgtcattcaaagtaagggcttcagaaacaggaaaaaaagtgct
aaagaaaatggacaagaaaacagcaccttgcaggaagctaatgtggatacacagcttaca
gataccagggtcaaaaggtgtcccctaagaaacaaaacccagaaatgtgactctgaaaaa
gggatttatatagagtttggttctgattcatctgaagagctttttaaacaggcaagcaat
gctgggttagaagacaaagaagcacttcagatttcatctcaagaaaagctagaagaactt
aagagtgctgagaaggggaataaatattcttgcaacacacagcctgacaagctgggtgct
aaagaaatagttctaccaagtgtcataggtgagagtgatttctcgaaggaaggcttgagc
aagaaaagcactcggagcatcactgaatatgccaaacctggccaagtgaatatgactgaa
taccggagttctcctttgaatgttcttgctgtagacctactcacagagcagtgtgacaga
ataggtaatgccagtcccttaaggaatggggacacatctttctttaagaacacagaagaa
atggatgcagagcaaactcagtgcaatagtaaaagcaaagagtttgacttaaaagatagc
tcagagagcaagttggataaagccaaggaaatagatattgttgtacaaagtgtggaagct
gtggaaatgtatgaacctgagaatgattcttcccatgaaaaagaaattcctctggagaaa
ctgcttcagccagagacacttcactgtgctaccctgaatcaagtctctaggaagagactg
aagcgaagcattcagaaagtcaatgaatggttttcaaaaagcaatgagattctgtcttcc
aattcttcccaggatgattctgctggagcaactgatgtttcaggtgaaggagatacatgt
ttatcagataaagattcctgtatttcagaaaagactgaccctatggtagattccatggaa
aatgcagtggttgaaggaaacaagagatggtcaaaacaaacagcagatagcatcaaagac
aaaatatttgggaaaacatacaaaagagagaggaaggcaaatccccctattatcttgaga
gacattttacctactacaaaaaaggaagatgtggctgctgatgagaagtgcttgaataat
tccagcaaagacggactaaaacgaaaaaggaagactgcccgtgtcctgcaacctgaggat
ttcatcaagaaaaaagatatagaagaggcagatgggtgccctcaaagtgttaactggtcc
cttggagatgctgaaaagaaaagaagtgatgaaagttctgctgttaatgagagttacctc
tctgagaatagagaggataatacactagcagaacttgaggaaggaggatccatatggaaa
aaagctactgaaaaggtgactcacaagcactgtgatggggagctagaactgaataactgt
gatcagaaaagcactaaaaaaagaagttctgcagcaaaaagatgcaggcgttctactaga
accatgtgtgctctacagttagtagtggatagacactctgtttcccctgatccagctgag
ccacagatcgatagctatccaagcagtgaagaaccaaggaaagtagattctgagcaaaga
caagtcaggcgcagcaggaggcttcagttactttctgaagaaatgatagaagaaacagga
aaaggagtagcaattaagggagccagaaagtatgacagtgatcatgatgggtctttcttt
gggctccagaggaatgtcttagttcacgcttctgaatgcaaagacctgtgtgaaccccag
ggtacgctgggttacaagccactcactaatctgaagggtggtgatctggaagcaaatgaa
atacagattagtctaaagaatttgtctgacactgcagaaactggaaaaagtctcttcgat
cctacatcttcatgtcagcattcaaattgtagttcctttgcacctgatgcaggttctcaa
gaaggtgaaatactaggtagccctttcctcgtacaggctccttcagtggctgttgtgcaa
actgcttcccactcgactgaagagatgactgaatcacgtactacttttccccaggatagt
ggacatgatacacaaaacattccaggggacttcagaactgaaaagttgccaatggctaaa
aatgtttcggaattgaccaaggaagctgaagatagtgagttagacacacagtatctgcga
aatatatttaggcattcaaaacgcctatcatttagcctttatcctactcccatgaaggca
tgtgcagtagaagatgctgcttctgaaactttaaagataccgtgtgctgctaaggtagaa
aataagcatagcaaatatttaaaaacagaagacttgcaagaagagaaaacaactgctgaa
agcttgagtagggtttgtgagaaagagacacttaagacttacgaatctgcttgtgttagt
cctgtgacttgctttgtcggcaacactgaatgtatgcacacaggggaacataaagaatac
gtttcacaggttgcaaatcaagggaatctgacaccagtaagaatgggtactgctaggact
aaagacaagaacagattgcaaaaaggagagtggggaaatgaaaagacagtgtcaactgac
acagggatagaaagcgagttgagacagaatccaatcaaaagtaacagaagccaaagtgat
cagagtaatacagaagagcacattttcaaaagaaccgatttaaacacagttgatgaaata
tgcttcagtgcagaaagcaatcaagcaggaaaggccaaagttgttgatggcaaaggacca
atactacattttcagtccagatcaatgatttgtcctgcaacttgtcagcaaaggcctgct
gaattcagctgtgaagtcattgggaaaaaaagcaaaagagaaagaaaacaagtaaagggg
aatgaagaacaagcaacccaaactgttagcacagggatgcctgagtgtttacttactgag
gctctagaagaacctcttaaagggaatagtgattttataggtttgtctgaaacccctgat
ggcttactgtgctctgatgatgatattgaagagaacaccagcttttctgaaactgatagg
agagagagatctgctgtgtttgtaaaaagaagtgacaatgccctggtaaaagagctacac
aatagacacgctaattctaagccaagatctcaaggtatccaaagatctcgaagaagagca
cagaaactgcaatcttcagatgaagaatctagcgaggatgaagatttaccgtgttttcag
acattaatatttggcaaatcagtaagcacacctttgcagatcaataaacaagtgacttct
gtggtagagtcttcagtaagtcccatcacgttgcctcacaatggaagtcatgatgacaat
aatatgcagaaaatgcctgaagctgccctaagtaatgagtgtggttcaccaagccaggag
tcagaatgttccgtcaacttattttcttcccagtccaacgtgtctgaagaatcagttgat
ggagcacaagagctgaagaaacctttaatacaagttcatacatccaaacaagtgagcaat
gtgaatgagagtaaagaaacttttcagagttttaatggagggctgaagagaaacaaaact
aacttcaaagatgaatgccaagaagacccaaacatgggagcaaacctaggtgaagcatct
ggatatgacagtgaaacaagtaatgtagaagattcatgtggaccattctctcagggtgaa
atccttactacacagcagaagaatgctatgcaaaataacctaaaaaaacttcagcaagaa
atggctgtacttgaagcagtgctaaagcagcatggaagtcaggactgtgaatttgtacct
atccatagggaactgccacattccagtagtgaaggaacacttggagtggaacaaatgaga
caagaaagaggggcagagtcaacctcagaaggaagctttgaaaatcataaatgcagcatt
tcaaagggattttcagccaatgatttccatgttatgccaagtgattctctcaacagtaaa
atcaaagagttagaaaaagaaaggtctccagaattgttgcttccatcttctaaatcctgt
ttgtttaagagaccagatttggaaaaaggccttcagtgtgacagtgttctgaagaacaaa
gctccttctgaaaagacaaaacctgtgcaggaagcagtgcaagaatatagtcagtgtcag
cttgaagcagaaaatgcagatgagcagaaatctgggaccaggctaaacagtgcatctgtc
ttatcaaatctctctggaaatgtgaccaggagtccaaataacgcgtcctcctctgtaagg
cttcttaaccctcgaactgcagaagcaacaaatagttctgttgtagctcagaatgctaac
aaaagctgtgctcaagaatgtaaatcgaagagaagtgtgtgttttcctatatctgttctg
cacaatgcagctgggaaagaaaatgctacaagtccagttgcgactaacaggaaagaaatg
tcaattgtggcatcaggtctgaatcaaagtgaacatttggtggtccagaagtttgcgaga
aaaactcagagcactttatctaatcacattactgaaggaacaacccatgtcataatgaaa
acagataaggacctggtgtgtgaacggacactgaagtactttctgggtattgcaggaaga
aaatgggtagttagttatcagtgggtaattcagtcttttaaagaaggaaggatactggat
gaggagaactttgaagttagaggagatgtaattaatgggagaaaccaccaaggtcctaag
agggctagacagtctctgactgaaaagatctttaaagactttgagatctgttgctatgga
cctttcactgatatgactacagaacatctagaatggatggtggagctttgtggtgcctct
gtcgtgaagcaacttcatctgttcacacacacaacaaattcgactgctgtcatggttgtg
cagccagatgcttgggtggaaaacatggattatagagcaatccagcaaaagaacaatgtt
gccatggtgactcgagagtgggtattagatagtgttgcttgctatgagtgccaggagttc
gatgcttaccttgtgtcctaa
DBGET
integrated database retrieval system
