Gymnogyps californianus (California condor): 127026392
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Entry
127026392 CDS
T08687
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
gcl
Gymnogyps californianus (California condor)
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gcl04040
]
127026392
Ion channels [BR:
gcl04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127026392
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
127026392
NCBI-ProteinID:
XP_050767569
LinkDB
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Position
28:complement(2946288..2979200)
Genome browser
AA seq
1840 aa
AA seq
DB search
MAGLPHIPGPENLRPFTPASLAAIEQRIAEAEALKVKRQQVELPEEEEIKPSSNLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYLLGPFHPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTLSNPPAWSKNVEYTFTGIYTFESLIKILSRGFCI
DSFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPLNDTLLGDLGLDNDTLAN
TALYSNFTDSIASNFTSNFTSNSTFDFEAYINDEANYYFLEGALDALLCGNSSDAGKCPE
GYQCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVVI
FLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKHQEEQEKMLQDRRS
SSGSPPSSVAEKERDSDVHSDQDKAKDCNGQVVPKVMLERSATVIGFNPTNEPEKSDRNH
LTVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLVWNCCPLWLKLK
EFVKLVVMDPFVDLGITICIVLNTVFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLK
LIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNM
LIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISLDCTLPRWHMNDFF
HSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFSAD
SLAASDDDGEMNNLQIAIGRITRGIDFVKTSVLMLLHRLWKGKKVAPEEEQEPNKTDNSV
LNHVDTGQEPKSEYLDGVTGKEHFFMDELDHMNFINNPNLTVQVPIASEESDLYEETSTQ
SDTEDAKNPLSSDNASSLCSTVDYKPPLPAEEEVAEEAEESNEPEECFTEACVKRFPCLY
VDITSDRGKVWWNIRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILE
YADKVFSYVFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLTANWLGYSELGAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY
YRCINTTSGELFDISVVNNKSDCMALLYTNEVRWVNVKVNFDNVGLGYLSLLQVATFKGW
MDIMYAAVDSREIEEQPMYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFG
GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKFQGMVFDFVTKQVFDITIMILICLN
MVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRYYYFTIGWNIFDFVVVIL
SILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIG
LLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFNFETFGNSIICLFQITTSAGWDGLLSPIL
NSGPPDCDPNLENPGSSVKGDCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFNVATE
ESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLKIPKPNKIKLITMDL
PMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMATNPSKVSYEPITTTLKRKH
EEVCATKIQRAFRRYLLRRSVKQASYMYRHSKDEDALREDAPEKEGLIATKMHEMYGNSG
TDVETAPAFGLAPVPSSEMRDARGGAKARDKERVVKESLV
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacatcccgggccccgagaacctccgccccttcacccccgcctcg
ctggctgccatcgagcagcgcatcgccgaggcagaggcactcaaggtaaagcggcagcaa
gtggagctgcctgaggaagaggagatcaagcccagcagcaacctggaagccggcaagaac
ctgcccctcatctatggtgacccaccgctggagctcatcgggacccccctagaggacctg
gaccctttctacaaggataagaagacattcatagtcctcaacaaagggaagtccatcttc
cgcttctcggcgacccctgccctctacctgctggggcccttccaccccatccgcagagga
gccatcaaagtgcttatccattcattattcagcatgttcatcatgatcacgattttaacc
aactgcgtgtttatgacgctgagcaaccccccagcgtggtccaagaacgtggaatacacc
ttcactgggatatacaccttcgagtccctcatcaagatactgtcgagaggcttctgcatc
gacagcttcacattcctgcgcgacccgtggaattggctggacttcatggtcatctccatg
gcctacattactgagttcgtggacctggggaacatctctgctctcaggaccttccgcgtc
ctccgcgccttgaaaaccatcaccgtgataccagggctgaagacgatcgttggggctctg
atccagtcagtgaagaagctctcggacgtcatgatcctcacagtcttctgcctgagcgtg
ttcgccctaatcggtctccagctcttcatggggaacctccggcagaagtgcgtgcggtgg
ccccccctcaacgacaccctgctgggggacttggggctggacaacgacacgttggccaac
acagcgctctacagcaacttcactgacagcatcgccagcaacttcaccagcaacttcacc
agcaacagcacctttgatttcgaggcctacatcaacgatgaagccaattactactttctg
gagggagcgctcgatgccctgctctgcgggaacagcagcgatgctgggaagtgccctgaa
gggtaccagtgcatgaaggcagggaggaacccgaactacggctacaccagctacgatacc
ttcagctgggctttcctggccctcttccgcctcatgacgcaggactactgggagaacctc
ttccagctgacgctgcgtgcagcagggaaaacatacatgatcttcttcgtggtggttata
tttcttggttccttctacctcatcaacctcatcctcgcagtggtggccatggcttacgca
gaacaaaacgacgccacgatgctggaggagcagcagaaggaggaggagtttcaacagctc
atggagcagctgaagaagcatcaagaggagcaagagaaaatgttgcaggaccggcggtcc
agcagcggttccccgcccagcagcgtggccgagaaggagcgcgactcggacgtgcacagt
gaccaggacaaggcaaaggactgcaacgggcaagtggtccccaaggtcatgctggagcgg
tctgctacggtgattggcttcaacccaaccaatgagccagagaaatcagaccgcaaccac
ctcactgtgggcaaccaagatgggccaggcctcgagaagagggtggggagtgccatcagt
gtcatctccaacgctgtggaagagctggaggaagctcaccagaagtgcccgccctggtgg
tacaaatttgcccacacgttcctggtctggaactgctgtcctctgtggctgaagctgaag
gagtttgtcaagctggtggtgatggaccccttcgtggacctgggcatcaccatctgcatt
gtgctcaacacagtcttcatggccatggagcattaccccatgacggaggagtttgagaac
gtgctgaccgtggggaacctggtctttacagggatcttcacggcagagatggtcctgaag
ctcattgctctggacccctacgagtatttccagcagggctggaacatcttcgacagcatc
atcgtcaccctgagcctggtggagctgggcctggccaacgtgcaagggctctccgttctc
cgctccttccgcttgctgagggttttcaagctcgccaagtcctggcccaccctcaacatg
ctcatcaagatcatcggcaactcagtgggcgccctggggaacctcacactggtgctggcc
atcatcgtcttcatcttcgccgtggtggggatgcagctctttgggaagagctacatagag
tgtgtgtgcaagatctccctcgactgcacgctgccccgctggcacatgaatgacttcttc
cactccttcctcatcgtcttccgcatcctctgcggggagtggattgagaccatgtgggac
tgcatggaggtggctggccagaccatgtgcctcatcgtcttcatgatggtcatggtcatc
gggaaccttgtggtgctgaacctgttcttagctttgctgctgagctccttcagtgccgat
agcctggcggcatctgacgatgatggagagatgaacaatttgcagatcgctattggcagg
atcaccagggggatcgactttgtaaagacctctgtcctcatgctgctccacaggctgtgg
aaggggaagaaggtggccccggaggaagaacaagagcctaataagacggacaactctgtg
ctaaaccacgtggacactggccaggagcccaagtcggagtacctggacggagttactggc
aaagagcatttttttatggatgaactggaccacatgaatttcattaacaaccccaacctg
acggtgcaagtccccatcgcctcggaggagtctgacctctacgaggagacgagcacccag
tccgacaccgaagatgccaagaatcccctctccagtgacaatgcatcgtccctgtgcagc
accgtggattacaagcccccgctgccagcagaggaggaggtggcagaagaggctgaggag
agcaacgagcccgaggagtgcttcaccgaagcctgtgtgaagaggtttccctgcctctac
gtggacatcaccagcgacagagggaaggtatggtggaacatccggaaaacctgcttccgc
atcgtggagcacgactggttcgagaccttcatcgtcttcatgattctcctcagcagtggg
gcgctggcttttgaggacatctacattgaacaacgaagggtgatacgcaccatcctggag
tacgccgacaaggtcttctcctacgtctttgtcattgagatgttgctcaagtgggtggcc
tacggcttcaaggtgtacttcaccaatgcgtggtgctggctggatttcctcatcgttgat
gtttccattatcagcctaacagcgaactggctgggatactctgagctgggagccatcaag
tccctgcggacactgagggctctgagaccactgcgtgccctgtccagatttgaaggcatg
agggtggtggtgaacgccttgctgggcgccatcccctccatcatgaacgtcctgctggtc
tgcctcatcttctggctgatattcagcattatgggggtgaacctctttgcggggaagtac
taccgatgcatcaacaccacctcaggggagctcttcgacatcagcgtggtgaacaacaag
agcgactgcatggccctcctctacaccaacgaggtcagatgggtcaacgtcaaggtcaac
ttcgacaacgtgggcttgggatacctctccttgctgcaggtggcgaccttcaaaggctgg
atggacatcatgtacgccgccgtggactcgcgcgagattgaagagcagccaatgtacgag
atcaacctctacatgtacatctacttcgtcatcttcatcatcttcggcgccttcttcacc
ctgaacctcttcatcggcgtcatcatcgacaacttcaaccagcagaagaaaaagtttgga
ggcaaagacatcttcatgacggaagagcagaagaaatactataatgccatgaagaagctc
ggctccaagaaaccccagaagcccatccccaggccatcgaacaagtttcaagggatggtg
tttgactttgttaccaagcaagtgtttgacataaccatcatgatcctgatttgtcttaac
atggtgaccatgatggtcgaaacagatgatcaaagcgaactcaaaacatctgtcctctac
aagataaacctggtcttcattgtcatcttcaccggagagtgtgtgctcaaaatgttcgct
ttgcgttactactacttcactatcggctggaacatctttgactttgtggtggtcatcctc
tccatcttaggtatcgtcctctcagacatcatagagaagtacttcgtatcacctaccctt
ttcagggtcatcaggctggcaaggattggccgtgtcctccggctgatccgaggggcgaaa
ggcatccggactctcctctttgctctgatgatgtccctgcctgccctgttcaacattggc
cttctgcttttcctcgtcatgttcatctactccatcttcgggatgtccaacttcgcctat
gtaaagaaggaggcagggatcgatgacatcttcaactttgaaacttttgggaacagcatc
atctgcctcttccagatcaccacgtcggctggatgggacggcctcctcagcccgatcctg
aacagcggtccccccgactgtgaccccaacctggaaaaccctggcagttcagtaaaaggg
gactgtggcaatccatccattggcatcttcttcttctgcagctacatcatcatttccttt
ctcatcgtggtgaatatgtacattgccattatcctggagaacttcaatgtggccacagag
gagagcagcgaacccctctgtgaagatgattttgaaatgttttatgaaacttgggagaag
tttgacccggacgccacgcagtttattgcatacagcaccttgtctgactttgtagacacc
ttacaggagccactcaaaattcccaagccaaacaagatcaagctaatcaccatggatcta
ccaatggttgctggggacaaaatccactgtctggatatcctctttgccttgactaaggaa
gtgctgggagactcgggagagatggatgccttgaaggccaccatggaggagaagttcatg
gccacaaacccctcgaaggtttcctatgaacccatcaccaccactttgaaaaggaaacac
gaggaagtctgtgctacaaaaatccagagggctttccggaggtacctcctgaggcgctcg
gtgaagcaggcgtcctacatgtacaggcacagtaaggatgaggatgccctgagagaggac
gcacccgagaaggaaggtctgatcgccaccaaaatgcacgagatgtatgggaacagtggg
acggatgtggagacagcccctgcctttggtcttgcacccgttcccagctcagagatgcga
gatgctcgtggcggagcaaaagcacgggataaggaacgtgttgtgaaagagtcgctggta
taa
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