Gymnogyps californianus (California condor): 127027565
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Entry
127027565 CDS
T08687
Name
(RefSeq) antiviral innate immune response receptor RIG-I
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl04622
RIG-I-like receptor signaling pathway
gcl04623
Cytosolic DNA-sensing pathway
gcl05164
Influenza A
gcl05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127027565
04623 Cytosolic DNA-sensing pathway
127027565
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
127027565
05168 Herpes simplex virus 1 infection
127027565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gcl04054
]
127027565
Enzymes [BR:
gcl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127027565
Pattern recognition receptors [BR:
gcl04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
127027565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C
CARD_2
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_19
AAA_25
Motif
Other DBs
NCBI-GeneID:
127027565
NCBI-ProteinID:
XP_050769304
LinkDB
All DBs
Position
Z:complement(16180796..16208813)
Genome browser
AA seq
929 aa
AA seq
DB search
MTAEEKRSLQCYRRYIEKSLNPVYILSNMADWLSDEVKERVRKEEEKGVTAAAALFLDAI
LQLEAEGWLRGFLDALVAAGYTGLAEAIENWDFSKLEKLELHRQLLKRIEATMLEIDPVA
LMPYINTCLIERECDEILQISEYRSKAAGITKLIECLCRSDKENWPKSLQLALHNAGYYN
ASELWDMREDNGKDVDGEMTDAFENSFETTMTFSEEAECDNNLSENLCSDSEGIYQSSPV
YEPKKIRSYQTELAQPAINGKNTLICAPTGSGKTFVAILICEHHFQNMPSGRKAKVVFLA
TKVPVYEQQKTVFQQHFERSGYSVQGISGETVANVSVEKVIQDSDIIVLTPQILVNSIGE
GILSSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFDSSANQLPQIVGLTASVGVGNA
KSIKETIEHICTLCSYLDIQAISTVRENKQDLQRFRNKPETHVRWVKMRVRNHFADIISG
LMSETEALMRKIYSVDTVSQINKNDFGTQKYEHWIVATQKKCRLLQLADKEKESSICRDL
FICTEHLRKFNDAVIISEDARIEDALAYLTDFFTNVKNGPYTELEKQLTAKFQEKEPELT
ALSKDESNENPKLEELACILDEAYRYNPQTHTLLFAKTRALVAALKKWIEANPLLSHITP
DVLMGRGRRDQKTGMTLPMQKGVLDAFKTNKDSRLLIATSVADEGIDISECNLVVLYEYF
GNVTKMIQVRGRGRARDSKCILVTSKTEVVENEEHNRYKEEMMNEAIENLQNWDETTFAR
KMLHMLSHEKVLRDSRKKQTRHKVVEGKNNLLCGKCKAYACSIDDIRVIKESHHTVLGDA
FKERYITKPHQKPVQFDCFEKKSKMHCLNTSCQHEWGITVKYKTFDNLPVIKIKSFVVEN
VETGTQMDFQKWKNINFSLKNFDVEETSS
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcggaggagaagaggagcctgcagtgctacaggcggtacatcgagaagagcctg
aaccccgtctacatcctgagcaacatggcggactggctgtccgacgaggtgaaggagaga
gtccgaaaggaggaggagaagggggtgacggcggccgccgcgctgtttctggatgccatt
ctgcagctggaggcggagggctggctccggggcttcctggacgccctggttgcagcaggt
tacactggactggcagaagcaattgaaaactgggacttcagcaaactggaaaaactggag
ttacatagacagctgttgaagcgcatagaagcaacaatgctagaaattgatcccgtagca
ctcatgccttacataaacacgtgcctgatagaaagggagtgtgatgagatcctgcagatt
agcgaatacagaagcaaagcagccgggataactaaactcattgaatgcctctgtcgatcg
gataaggaaaactggccgaaaagccttcagctggcactacataatgcaggatattacaat
gcaagtgaactgtgggatatgagagaagataatggcaaagatgttgatggggaaatgaca
gatgcctttgagaacagctttgaaaccacgatgacattttctgaagaagcagaatgtgat
aataatctcagtgaaaatctctgttcagattcagaagggatctatcagtcttcacctgtt
tatgaaccaaagaagattcggagctaccagactgaacttgcgcagcctgctatcaatggg
aaaaacacattgatatgtgcacccacaggatctggaaaaacttttgtggcgattctgatt
tgtgaacaccatttccaaaacatgccctcaggacgaaaggcgaaagttgtctttcttgca
accaaagtgccagtctatgaacaacagaaaactgtattccagcagcattttgaaagaagt
ggatattccgttcaaggaattagtggtgaaacagttgcaaatgtctctgtagaaaaggtt
atacaggacagtgacatcattgtgctaacgcctcagattcttgtgaatagcatcggggaa
ggcatccttagctccctctccatcttcactctgatgatatttgatgagtgccacaacact
acgggcaaccatccttacaatgtgttaatgaccagatacctggaacaaaaatttgactcc
tctgcaaaccagctgcctcagattgtaggtttaactgcttctgttggagttggtaatgcc
aagagcatcaaggaaacaatagagcacatctgtaccctttgctcctaccttgacatacag
gccatatccactgtcagagagaacaaacaggatctgcagagattcagaaacaagccagaa
acacatgtcagatgggttaaaatgcgagttcggaatcactttgcagacattatctcaggt
ctgatgtctgagacagaggcattgatgaggaagatttactcagtggatactgtctcgcaa
atcaacaagaatgattttggaacacagaaatatgaacactggatagttgccactcagaag
aaatgcagactcttgcaactggcagataaggagaaggagagcagcatttgcagagacctt
ttcatttgtactgaacacctgcggaaattcaacgatgctgtcatcatcagtgaagatgcc
cggattgaagatgctttagcctacctaactgactttttcacaaatgtcaaaaatggacca
tatacagagttagagaagcaactgacagccaaatttcaagagaaagaaccagaactgact
gccctttcaaaagatgaatcaaatgagaatcccaagctggaagagcttgcttgcatcctg
gatgaagcgtaccgctataacccacagactcacactcttctctttgctaagacaagagcc
ttagtagctgctttgaagaagtggatagaagcaaaccctctgcttagccacataacacca
gatgtgttgatgggtcgtggaagaagagatcaaaaaacaggtatgaccctcccaatgcag
aagggtgtactggatgcattcaaaaccaacaaagacagcagactgctaattgctacatct
gttgctgatgaaggcattgatatttctgagtgcaaccttgttgtgctctatgaatacttc
ggtaatgtcaccaaaatgatccaagtcagaggtcgtggaagggcaagagacagcaagtgc
atccttgtgacaagcaaaacagaagtggttgagaatgaggaacacaaccgttacaaggaa
gaaatgatgaatgaagctattgaaaacctacagaattgggatgaaacaacatttgcaaga
aagatgttacacatgctgagtcatgaaaaggtattacgagattccaggaagaaacaaaca
agacataaggttgtggaagggaaaaacaaccttctgtgtggaaaatgcaaagcatatgcc
tgcagcatagatgacatcagagttataaaggaatctcatcacactgtcctaggagacgca
ttcaaggagcgttatataacaaagcctcaccagaaaccagtccagtttgattgttttgag
aaaaaaagcaagatgcactgcctaaatactagttgccagcatgaatggggaatcacagtg
aagtacaagacatttgataatctaccagtgatcaaaatcaaaagctttgtagtagagaac
gttgaaactgggacacaaatggattttcagaaatggaagaatattaatttttctttgaag
aattttgatgttgaagaaacatccagctga
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