Gymnogyps californianus (California condor): 127029397
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Entry
127029397 CDS
T08687
Name
(RefSeq) LOW QUALITY PROTEIN: lactosylceramide 4-alpha-galactosyltransferase-like
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl00601
Glycosphingolipid biosynthesis - lacto and neolacto series
gcl00603
Glycosphingolipid biosynthesis - globo and isoglobo series
gcl01100
Metabolic pathways
Module
gcl_M00068
Glycosphingolipid biosynthesis, globo-series, LacCer => Gb4Cer
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
127029397
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
127029397
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gcl01003
]
127029397
Enzymes [BR:
gcl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
127029397
Glycosyltransferases [BR:
gcl01003
]
Glycan extension
P blood group
127029397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
127029397
NCBI-ProteinID:
XP_050770960
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Position
1:142475115..142491951
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AA seq
383 aa
AA seq
DB search
MSFSSFPLQITTVVLGEQALTGVRMLRMPNCLLKLTRVVLSHKLRALFILAFKFMFFVSI
TLYWRIAEDPKSRGQVYSLPVEIRCAHSVPSPPRAVGGGPPPSPGDVFFVETSERTNPSY
LFMCSVESTARTHPGTRVVVLMKGLANGSASLPSHWGFSLLSCFPNVEFRPLDLPELFSG
TPLAKWYLQAQQRWEPYFLPVLSDACRIAIMWKFGGIYLDTDFIVLKNLKNLTNVLGTQS
KYVLNGAFLSFKPKHEFMELCMQDFVENYNSWIWGHQGPQLLTRVFKKWCSIRSLQSSTS
CKGVSTLPREAFYPIRWQDWKKYFEAVNSSELHHLFNNTYAVHVWNKKSQGTRLEITSQA
LLAQLYSHFCPATYGVMKDSERQ
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttcttctttcccccttcagatcacaacggttgtcttgggagagcaggctctg
acgggagtgagaatgctcaggatgcccaactgcctgctaaaactgaccagggtggtgctg
agccacaagctcagagctctgtttatcctcgcctttaagttcatgttctttgtctccatc
acgttgtactggagaattgcggaggaccctaagagcagaggccaggtctacagcttgcct
gttgaaatccgctgtgctcactctgtgccttctcctccccgcgccgttggtggtgggccc
cctccttccccaggggatgtgttttttgtggagacctcggagcgaactaacccaagttac
ctgttcatgtgctctgtggagtcaacggccaggacgcaccctgggacaagggttgtggtg
ctcatgaaaggcttggcaaacgggagtgcctcgttacccagccactggggcttctcgttg
ctgagctgctttcccaacgtggaattccggcccctggacttgccagagcttttctctgga
acacctctggcaaagtggtacttgcaggctcagcagcgctgggagccttatttcttaccc
gtcctgtctgacgcctgcagaattgccatcatgtggaaatttggtggcatctacctggac
acagacttcattgtgcttaagaacttaaagaacctcaccaatgtgcttggtacccagtcc
aagtatgtactgaatggggcttttctgtcctttaagcccaagcacgagttcatggagctt
tgcatgcaggactttgtggagaactacaacagctggatctgggggcaccagggcccacag
ctcctaacgcgtgtcttcaagaagtggtgctccatcaggagtcttcagagcagtacaagc
tgcaaaggagtgagtactctgccacgtgaggctttttatcccattcggtggcaagactgg
aagaaatactttgaagcggtcaactcctcggagcttcaccacctctttaataacacctac
gcggtgcacgtatggaacaagaagagccaagggacaaggctagagatcacgtcccaggct
ttgctggctcagctgtattctcacttctgccctgcaacgtacggtgtcatgaaggactct
gaaaggcagtga
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