Geobacillus sp. 12AMOR1: GARCT_02146
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Entry
GARCT_02146 CDS
T03966
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GARCT_02146 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gea03400
]
GARCT_02146 (nth)
Enzymes [BR:
gea01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GARCT_02146 (nth)
DNA repair and recombination proteins [BR:
gea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GARCT_02146 (nth)
Prokaryotic type
GARCT_02146 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AKM19399
LinkDB
All DBs
Position
complement(2130458..2131129)
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AA seq
223 aa
AA seq
DB search
MLTKQQIRCCLDVMADMFPNAHCELVHRNPFELLIAVVLSAQCTDALVNKVTKHLFEKYR
TPHDYIAVPLEELEQDIRSIGLYRNKAKNIQKLCAMLIEEYNGEVPRDRDELMKLPGVGR
KTANVVVSVAFGVPAIAVDTHVERVSKRLGFCRWDASVLEVEQTLMKTIPKEEWSITHHR
MIFFGRYHCKAQAPQCPVCPLLHLCREGKKRMRKRENKRARAD
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaagcagcaaatccgctgctgtttggacgtgatggcggacatgtttcccaat
gcccattgcgaacttgtgcaccgcaatccgttcgaactgttgatcgcggtcgttttgtca
gcgcaatgcaccgatgcgctcgtcaataaggtgacgaaacatttgtttgaaaaataccga
acgccgcacgattacatcgcggtgccgcttgaagagctggagcaagacatccgatcgatc
ggattataccggaacaaagcgaaaaatattcaaaagttgtgcgcgatgctgattgaggag
tacaacggtgaggtgccgcgcgaccgcgatgaattgatgaagctgccgggcgtcggaagg
aagacggccaacgtcgtcgtctccgtggcatttggcgtgccggccatcgccgttgatacg
catgtcgagcgggtcagcaagcggctcggcttttgccgttgggacgcgtcagttctggaa
gtggaacaaacgttgatgaaaaccattccaaaggaagaatggtcgatcacccaccaccgg
atgatttttttcggccgctaccattgcaaggcgcaggcgccgcaatgcccggtatgcccg
cttcttcatttatgtcgcgagggaaaaaagcggatgcgaaagagggaaaacaaacgtgcg
cgtgccgactga
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