Geobacillus sp. 12AMOR1: GARCT_02963
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Entry
GARCT_02963 CDS
T03966
Symbol
patB
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
gea
Geobacillus sp. 12AMOR1
Pathway
gea00270
Cysteine and methionine metabolism
gea00450
Selenocompound metabolism
gea01100
Metabolic pathways
gea01110
Biosynthesis of secondary metabolites
gea01230
Biosynthesis of amino acids
Module
gea_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
gea00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GARCT_02963 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GARCT_02963 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gea01007
]
GARCT_02963 (patB)
Enzymes [BR:
gea01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
GARCT_02963 (patB)
Amino acid related enzymes [BR:
gea01007
]
Aminotransferase (transaminase)
Class II
GARCT_02963 (patB)
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GFIT
Motif
Pfam:
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AKM20192
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Position
2879381..2880595
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AA seq
404 aa
AA seq
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MFPSDEGKSHAQNGEGTAASLFDRVIDRRGTLSVKWDDTKRVFGHEDVWPMWVADMDFPA
PPEVQEALRRRVEHGVFGYTVIPDSLKEAVCQWLERRHDWTIDPSWLVFAPGVVPAVAAA
IEAFSEPGDGVVVFSPVYRPLFDLVRRHGRTLIFSPLRLAEENYVIDWNDLEAKLPGAKL
LILCHPHNPGGKSWTAAELERLGELCLKHGVFVLSDEIHADLTLPPHQHAPFAALRPEFA
AQSATFRAPTKTFNLAGLQAAEAVIPDDSRRRAFRRIQQRHGFFTLNAFAVVGAEAAYRC
GGPWLDALLAYLQENIEVAAAYLADRLPALHLIRPQATYLIWIDCRGLGLSEAELKRRLL
ESGKLAVEFGSKFGPEGAGFIRLNAACPRPTLEEGLRRLGAALG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgtccgatgagggaaaaagccatgcccaaaacggggaaggcacggccgcgtcc
ctgttcgaccgcgtgattgaccgccggggcacgctgtccgtgaaatgggatgatacaaag
cgcgtattcgggcatgaagacgtctggccgatgtgggtcgccgatatggattttccggcg
ccgcccgaagtgcaggaagcgctgcggcggcgggttgaacacggcgtgtttggctacacc
gtcattcccgattcactcaaagaagcggtgtgccaatggcttgaacgccgtcatgactgg
acgatcgatccgtcttggctcgtgtttgcccctggcgttgtgccggcggtcgccgctgcc
attgaggcgttttcggagccgggggatggcgtcgtcgtgttctcgcccgtctatcggccg
ctgtttgatctcgtccgccgccacggacgcacgctcatattcagcccgctccggctggcg
gaagagaactacgtcatcgactggaacgacttggaagccaaactgcccggggcaaagctg
ctcatcctttgccatccgcacaatcccggaggcaaatcgtggacggccgccgagctcgag
cggctcggggagctgtgcctcaaacacggcgtcttcgtcttatcggacgaaattcacgcc
gatttgacgcttccgccgcaccagcatgcgccgttcgccgcgcttcgtcccgagtttgcg
gcgcaaagcgccacattccgcgcgccgacgaaaacgttcaacctggccggcttgcaggcg
gccgaagcggtcattcccgacgattcgcggcgccgggcgttccgccgcatccagcagcgt
cacggcttttttacgttgaatgcgttcgccgttgtcggggcggaggccgcgtaccgatgc
ggcgggccgtggctcgacgccttgcttgcctacttgcaggaaaacatcgaggtggccgcc
gcctatttggccgaccgtctgccggcgcttcacctcatccggccgcaggcaacgtatctc
atctggatcgactgccgcggcctcggcctttccgaggcggagctgaaacggcggctgttg
gaaagtggaaaactggctgttgaattcggcagcaaattcggtcccgaaggcgccggcttc
atccgcttaaacgccgcctgcccacgcccgacgctcgaagaagggctgcggcggctgggg
gcggcgctaggctag
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