Geobacter sp. 60473: GEO60473_02720
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Entry
GEO60473_02720 CDS
T10337
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gec Geobacter sp. 60473
Pathway
gec01501
beta-Lactam resistance
gec01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gec00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GEO60473_02720
01503 Cationic antimicrobial peptide (CAMP) resistance
GEO60473_02720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gec03036
]
GEO60473_02720
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gec02000
]
GEO60473_02720
01504 Antimicrobial resistance genes [BR:
gec01504
]
GEO60473_02720
Chromosome and associated proteins [BR:
gec03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GEO60473_02720
Transporters [BR:
gec02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GEO60473_02720
Antimicrobial resistance genes [BR:
gec01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GEO60473_02720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
CzcB_C
BSH_RND
HH_MFP_RND
OEP
RND-MFP_C
HH_EMRA
Beta-barrel_YknX
HH_YBHG
BSH_YknX
BSH_CusB
HH_AprE
Uds1
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
BET57232
LinkDB
All DBs
Position
302128..303288
Genome browser
AA seq
386 aa
AA seq
DB search
MTVKWMVCVLGGILFAGSLAGCSKDGDAKIARGEKPALAVETVPVTARDLAEGIEVTGSL
EPKFSADVKTQIPGLVKQVYVTEWVRVRKGTPLARIDTAEPEALAKRAEASVESARAALA
QAQVSANRAERELARIIKLKESGLATQQSVDDARTESAAAQARIDAAQAQIRVAQEELRQ
ARARLAKGLVVSPLDGVVALRDVNVGDLAGDAATGKAIFRVVDNRVLNLTVTIPSADSAR
VRVGQPLEFSVDALPGKTFTGKVMFINPELSAEDRSLRVIAEVRNDGELLKGGLFAKGRI
LVGRRPAVVQVPRGALTAWDTASKKASLFVVAGNVAKVKQVETGVVIGDEVEIVRGVGPG
EQLVTRGGFNLKDGDVVTVAGKGAVQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgacagtcaaatggatggtgtgcgtgctcggcgggattctctttgccgggagccttgcg
ggatgttcgaaagatggcgatgcaaaaatcgctcggggggaaaagccggcgttggcggtg
gaaacggttcccgtgaccgcccgcgacctggcggagggaatagaggtcaccggcagcctt
gagcccaaattctcggccgacgtcaaaactcagattcccggactggtgaagcaggtctac
gttacggagtgggtacgggtccgcaaggggacccctctggcgcgcatcgacactgccgag
ccggaggccctggcaaagagggcggaggcgtcggtggaatctgcccgggccgcgctggcc
caggcccaggtaagtgccaacagggccgagcgggagcttgcgcggatcatcaagctgaag
gagtcggggcttgccacccagcagtcggtggacgatgcccgcaccgaatcggccgcggcc
caggccaggatcgatgccgcccaggcccagatccgggtggcccaggaggagctccggcag
gcgcgggcacgcctggccaagggtctcgtggtatccccgttggacggagtggtggccctg
cgggacgtgaacgtgggggacctggcaggcgacgcggcaacgggcaaggcgatcttccgt
gtcgtggacaacagggtgctcaacctgaccgttaccatcccgtcggcagactcggcgcgg
gtcagggtcggccagcccctggagttttccgtggatgccctgccggggaaaacattcacc
ggcaaggtcatgttcatcaaccccgaactctctgccgaggaccgttcgctgcgggtcatc
gcggaggtccgcaatgacggggaactcctcaaaggggggctcttcgccaagggaagaatc
cttgtgggccggcggccggcggtcgttcaggtgccgaggggggccctgaccgcctgggat
actgcctcgaagaaggcgagcctcttcgttgtagccggaaacgtggcgaaggtaaagcag
gtggaaaccggagtggtgatcggggatgaagtggagatcgtcaggggggtcggccccggt
gagcagctcgtgaccagggggggcttcaacctgaaggacggcgacgtcgtgaccgttgcc
gggaagggcgctgtgcaatga
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