Geobacter sp. 60473: GEO60473_22100
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Entry
GEO60473_22100 CDS
T10337
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gec Geobacter sp. 60473
Pathway
gec01501
beta-Lactam resistance
gec01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gec00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GEO60473_22100
01503 Cationic antimicrobial peptide (CAMP) resistance
GEO60473_22100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gec03036
]
GEO60473_22100
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gec02000
]
GEO60473_22100
01504 Antimicrobial resistance genes [BR:
gec01504
]
GEO60473_22100
Chromosome and associated proteins [BR:
gec03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GEO60473_22100
Transporters [BR:
gec02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GEO60473_22100
Antimicrobial resistance genes [BR:
gec01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GEO60473_22100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
Beta-barrel_RND
CzcB_C
HH_MFP_RND
BSH_RND
HH_CzcB
RND-MFP_C
BSH_CzcB
Beta-barrel_YknX
Beta-barrel_AprE
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
BET59170
LinkDB
All DBs
Position
2478606..2479724
Genome browser
AA seq
372 aa
AA seq
DB search
MKKRIFLTILGLVAVIAVLGGIKALQIGAMIDQGKKFVPPPETVSTAPVKADSWETALTS
VGTLTAVQGVTVAAELPGKVVQIAFEAGAPVARGALLLRQDTSNEEAQLPGAQAEAKLAR
ANLRRSDQLLAEGIIAQADHDSAVATANQAQAQVDNIRATIAKKSIRAPFSGRLGIRQVN
LGQILREGDPIVTLQSMDPIFVDFTLPQQQLSQLRKGLTVRVTTDALPGETVEGRVTAIN
PEVDAESRNIKVQATVANRGEKLRPGMFVNVAVGLPVQEKVLAIPATAVLYAPYSDSVFV
VEDDKDKKGKVLRQQFVRLGTKRGDFVAVTSGLKEGEQVVTTGVFKLRNGQAVVVDNKLA
PSFQQAPKPENN
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcgcatctttctcaccatcctcggcctggtcgcggtcatcgccgtgctgggc
ggcatcaaggcactgcagatcggcgccatgatcgaccagggcaagaagttcgtcccgccg
cccgaaaccgtttcaacggcgccggtgaaggccgattcgtgggaaacggccctcacgtcg
gtcggcacgctgaccgcggtgcagggggtcacggtggcggccgaactgccgggcaaggtg
gtgcagatcgctttcgaggcgggggcgccggtggccaggggggccctgctgctgcgccag
gatacgagcaacgaggaggcccagctgccgggcgcccaggccgaggcgaagctggcccgc
gccaacctgcgccgctcggatcagctgctggcggaggggatcatcgcccaggccgaccac
gacagcgccgtggccacggccaaccaggcccaggcccaggtggacaacatccgggccacc
attgccaagaagtcgatccgcgcccccttttcgggccgcctcggcatcaggcaggtgaac
ctggggcagatcctgcgggagggggaccccatcgtgacgctccagtccatggacccgatc
ttcgtggacttcaccctgccccagcagcagctgtcgcaactgcgcaaggggctgacggtg
cgggtgaccaccgacgccctgcccggcgagaccgtcgagggacgggtcaccgccatcaat
ccggaggtggatgccgaatcgcgcaacatcaaggtccaggccacggtggccaacaggggt
gaaaagctgcgccccggtatgttcgtgaacgtggcggtggggctccccgtgcaggagaag
gtgctcgccatcccggccacggcggttctctatgccccctacagcgattcggtcttcgtg
gtggaggatgacaaggacaagaaggggaaggtgctgcgccagcagttcgtacgcctcggc
accaagcggggcgattttgtggcggtgaccagcgggctcaaggaaggcgagcaggtggtg
accaccggcgtcttcaagctgcgcaacggccaggcggtggtggtggacaacaagctcgcc
ccctccttccagcaggcaccgaagccggagaataattag
DBGET
integrated database retrieval system
