Geobacter sp. 60473: GEO60473_32590
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Entry
GEO60473_32590 CDS
T10337
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gec Geobacter sp. 60473
Pathway
gec01501
beta-Lactam resistance
gec01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gec00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GEO60473_32590
01503 Cationic antimicrobial peptide (CAMP) resistance
GEO60473_32590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gec03036
]
GEO60473_32590
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gec02000
]
GEO60473_32590
01504 Antimicrobial resistance genes [BR:
gec01504
]
GEO60473_32590
Chromosome and associated proteins [BR:
gec03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GEO60473_32590
Transporters [BR:
gec02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GEO60473_32590
Antimicrobial resistance genes [BR:
gec01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GEO60473_32590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
RND-MFP_C
BSH_CusB
BSH_RND
HH_YBHG
BSH_YknX
CzcB_C
BSH_CzcB
Biotin_lipoyl
QRPTase_N
HH_MFP_RND
HH_CzcB
NQRA_N
DUF7620
Motif
Other DBs
NCBI-ProteinID:
BET60219
LinkDB
All DBs
Position
3619755..3620867
Genome browser
AA seq
370 aa
AA seq
DB search
MRMGRGVRAACGVVLLAAALTGCGHKADKAESEQPPVVTGVTLVQAAGEAIPDGAEVVGT
VRAADVAVIAARLPATVTGVLVREGDRVGRGKLLVTLEAAESSAQASAAAAQVAEAERAL
DEARARKRLADATYERYANLFKDEAVTRQEMDNRRADRDVAEQGVERATARLTASRENAR
AAGVVAGYTRIVSPLAGVVTAKQVENGMTVFPGTPLVTIEGDGGRRLEASVPESLAGRIR
LGQRVPVTIEGAGLSLDGRVVEIVPTADPASRTFTVKVELAGAGIRSGMFGRAFIATGQR
QGILVPKSAVMERGALSSVWTLDQGNVARLRLVKTGKTLGGRIEILSGITAGERVIAAGL
EKVVEGAKIQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggggagaggagtgagagcggcctgtggcgtcgtcctccttgctgcggccctc
acggggtgtggccataaggcggacaaggcggaatcggaacagccccccgtcgtgacggga
gtgacactggtccaggcagccggagaggctatcccggacggcgcggaggtggtggggacg
gtacgcgccgcagacgtcgccgtcattgcggcccggcttcccgccaccgtaaccggcgtt
ctcgtgcgggagggggaccgtgtgggcaggggaaaactcctggtgacccttgaggccgcc
gagagttcggcccaggcgtccgctgcggccgcccaggtggccgaggcggagcgggcgctg
gacgaagcccgtgcccgcaaacggctggccgacgcaacctatgagcgctacgccaacctc
ttcaaggacgaggcagtgacccgtcaggagatggacaaccgccgtgccgaccgggacgtg
gccgagcagggtgtcgagcgggccacggcccgtctgacggcgagcagggagaatgcgcgg
gcggccggggtggtggcgggctacacccgcatcgtctcgccgcttgccggggtagtgacc
gcaaagcaggtggaaaatggtatgaccgtgtttccgggtacgccgctggtgactatcgag
ggtgacggggggcgccgacttgaggcgtccgttcccgagtccctcgccggccggataaga
ctcggccagcgcgtgccggtgaccatcgagggagccggtctctcgctggatggccgggtg
gttgagatcgtgcccaccgccgatccggcgagcagaactttcaccgtcaaggtggaactg
gcgggcgcggggatcaggtccggcatgtttggtcgggccttcatcgctaccggccaacgg
cagggaatcctcgtgccgaagtcggcggtgatggagcggggggctctctcctcggtctgg
acactggaccaggggaacgtcgcccggctgcgactcgtgaagacgggaaaaaccctgggc
ggccggatcgagattctttcgggcattacggccggtgagcgggtcattgcagccggactg
gaaaaggtggtcgagggggcgaaaatccagtag
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