Geobacter sp. M21: GM21_2948 Help Entry GM21_2948         CDS       T00933                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism gem  Geobacter sp. M21 Pathway gem03030   DNA replication gem03410   Base excision repair gem03420   Nucleotide excision repair gem03430   Mismatch repair Brite KEGG Orthology (KO) [BR:gem00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     GM21_2948    03410 Base excision repair     GM21_2948    03420 Nucleotide excision repair     GM21_2948    03430 Mismatch repair     GM21_2948  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:gem03032]     GM21_2948    03400 DNA repair and recombination proteins [BR:gem03400]     GM21_2948 Enzymes [BR:gem01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      GM21_2948 DNA replication proteins [BR:gem03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      GM21_2948 DNA repair and recombination proteins [BR:gem03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      GM21_2948    NER (nucleotide excision repair)     GGR (global genome repair) factors      GM21_2948    MMR (mismatch excision repair)     DNA ligase      GM21_2948   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       GM21_2948 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 Nlig-Ia HHH_5 BRCT DNA_ligase_ZBD HHH PTCB-BRCT 5_3_exonuc Zn_ribbon_NUD Motif Other DBs NCBI-ProteinID:  ACT18977 UniProt:  C6E2L7 LinkDB All DBs Position 3428292..3430298 Genome browser AA seq 668 aa AA seqDB search MDKTAAAQRIKWLSSEIERHNRLYYEQDMPEITDAEYDALFRELKELEASHPDLALPDSP TGRVGGRPVAKFTQVRHTTPMLSLENAFTDKDIVDFDDRVKRFLGLSGQAEIGYVCEPKM DGVAVELVYREGLLAIGSTRGDGVVGEEVTQNLKTIKDIPLRLQTEEPPRLLTVRGEVYL PLEPFRKFNQEREEAGEPPFANPRNAAAGSLRQLDSKITAKRPLSIFCYAPGEVDGVAFD SQSHFLSTIPTWRIPVNPLTKLVSGVQGVLDYYHEMMEKRDDLPYEIDGVVVKVDRFSLQ RDLGEKSRSPRWAIAWKFPPRQATTVVNDIVPQVGRTGVITPVAHLEPVNVSGVMVSRAT LHNWEEMERKDIRRGDTVVVERAGDVIPAVVQVLVEKRQGSETLLPVPQACPVCGGEVVR IPGEVAVRCVGLNCPAQALERVKHFAARRAMDIDGLGEKFIEQLLNLKLIRNVADIYRLT EEDFMRFERMGKKLAENLLNSIAASKERELSRLIFALGIRHVGEHTAKLLAGAFGSMENL AAASEEELTSIREVGPQVAASIADFFKSEENLEVLRELKEHGVNPKAEEKRVGGRFTGKT FVFTGALEKFTRDEAKKMVELEGGHAAGSVSKKTDYVVAGADAGSKLEKAQQLGVRVLSE DDFLELMR NT seq 2007 nt NT seq  +upstreamnt  +downstreamnt atggataaaactgccgcggctcaaaggatcaagtggttaagctcggagatcgagcgccac aaccggctctactacgaacaggacatgccggagataaccgatgccgagtacgatgcgctc ttccgcgagttgaaggaacttgaggcctcccatcccgacctcgccctccccgattccccg accggcagggtcggcgggcgcccggtggctaagttcacccaggtgcgccacacaacgccg atgctttcgctggaaaacgccttcacggataaggacatcgtcgacttcgacgaccgggtg aagcgctttctggggctttcagggcaagcggagatcggttacgtctgcgagccgaagatg gacggcgtcgcagtggagttggtgtaccgtgaagggctcctcgccatcggctccacccgc ggcgatggggtggtgggcgaggaggttacccagaacctgaagaccatcaaggacataccg ctgcggctgcagacggaggagcctccgcggctcttgacggtgcggggcgaggtgtacctc ccgctggaacctttcaggaagttcaaccaagagcgcgaggaggcgggggaacctcccttc gcgaacccgcgtaatgcggcggcagggtccctgcgccagctcgactcgaagatcaccgcg aagcggccgctaagcatcttctgctacgcccctggcgaggtggacggagtcgccttcgat tcacaaagccatttcctaagcaccatccccacctggcgcatcccggtgaacccgctgacc aagctcgtctcaggcgtacagggggtgctcgactactatcatgagatgatggaaaagcgc gacgatctcccgtacgagatcgacggcgtggtggtgaaggtggaccggttttccctgcag cgcgacctgggggagaagagccgctcgccgcgctgggccatagcctggaagttccctccg cgccaggcgaccacggtggtcaacgacatcgtgccccaggtgggtcggaccggcgtcatc accccggtagcgcatctcgaaccggtgaacgtctccggcgtgatggtgtcccgcgcgacg ctgcacaactgggaggagatggagcgcaaggacatccgccgcggcgacaccgtagtcgtg gaacgcgccggggacgtcattccagccgtggtgcaggtgctggtcgagaaaaggcagggg agcgagacgctgctcccggtgccgcaggcgtgtcctgtgtgcggcggcgaagtggtcagg ataccgggcgaggtcgccgtgcgctgcgtcggcctcaactgtcccgcgcaggcattggaa cgggtgaagcattttgccgcccgccgcgccatggacatagatgggctgggcgagaagttc atcgagcagctcctgaacctgaagctgatacggaacgtcgccgacatctaccggctcact gaagaggacttcatgcggttcgagcgcatggggaaaaagctggcggagaaccttctgaat tccatcgcggcgagcaaggagcgggagctttcccgcctaattttcgcgctcgggatacgg catgtgggggagcacaccgcgaagcttttggccggcgccttcgggagcatggaaaatctc gcggcggcgagcgaagaggagttgacctccatccgcgaagtcgggccgcaggtggcggcg agcatcgcggatttcttcaagagcgaagagaacctggaagtgctcagggagttaaaggag cacggggtgaatcccaaggcggaagagaagcgggtcggcggcaggttcaccggcaagacc ttcgtctttaccggcgcgctggagaagttcacgcgcgacgaggcgaagaagatggtggag ctggagggggggcatgcggccggttccgtgtccaagaagaccgactacgtcgtcgccggc gccgatgccgggagcaagctcgagaaggcgcagcagttgggagtgcgggtgttgagcgag gatgattttctggagttgatgcggtag

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