Geothrix sp. PMB-07: Q9293_04175
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Entry
Q9293_04175 CDS
T09655
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gep
Geothrix sp. PMB-07
Pathway
gep01501
beta-Lactam resistance
gep01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Q9293_04175
01503 Cationic antimicrobial peptide (CAMP) resistance
Q9293_04175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gep03036
]
Q9293_04175
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gep02000
]
Q9293_04175
01504 Antimicrobial resistance genes [BR:
gep01504
]
Q9293_04175
Chromosome and associated proteins [BR:
gep03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Q9293_04175
Transporters [BR:
gep02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Q9293_04175
Antimicrobial resistance genes [BR:
gep01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Q9293_04175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CzcB
YknX_C
BSH_RND
BSH_CusB
RND-MFP_C
Biotin_lipoyl
CzcB_C
HH_AprE
BSH_YknX
DUF4349
CDC48_2
CusF_Ec
CCDC93_CC
Cep57_CLD
Motif
Other DBs
NCBI-ProteinID:
WLT32530
LinkDB
All DBs
Position
963265..964305
Genome browser
AA seq
346 aa
AA seq
DB search
MMLNRKAAGVLALSTLLLGALACGRREYHSEIKDLPKVAVTLVAGSSSESGNWLAATLQA
TRTANLSTRVGTQVKRVLAQEGQRVAAGSLLLVLGDEDLQAQLRAAETGLATVEAQHRRM
TALFAQKAATTAEVEQTQAQLAQAQAGVASLKANIAYTQIRAPFAGVVQARKVNEGDFVG
PGMPLIELVGEGEQEWVATFSEAEGRLLKAGQKIRFESEGTAGEAQVTALSPGGDAFSHK
GTLRARVLKPKDLRQGAFGRLLLSGAKSEDLMVPRSALVLRGELTGVFLAKEGRTELRWI
TLGEGSGNSLPVRSGLKAEDRVIDRPGSLQDGQPIDIKQGGVSHVH
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgaatcggaaggctgcgggcgtcctcgccctttccacgctgttgctcggagcc
ctcgcctgcgggcgccgggagtaccactccgagatcaaggacctgcccaaggtggccgtc
accctggtggcgggcagctcttcagagagcggcaattggttggccgccaccctgcaagcc
actcgcacagcgaacctgtcgacccgcgtgggcacccaggtgaagcgggtgttggcgcag
gagggccagcgtgtggccgcgggcagcctgctgctcgtgctgggcgatgaggacctgcag
gctcagctcagggctgcggaaaccggcctggccacggtggaagcccagcatcgacgcatg
acggcactcttcgcgcagaaggccgcgaccaccgccgaagtggagcagacccaggcccag
ctggcccaggctcaggcgggcgtcgcctccctcaaggccaacatcgcctacacccagatc
cgcgcgccattcgcaggcgtggtgcaggcccgcaaggtcaacgaaggtgacttcgtgggc
cccggcatgcccttgatcgaactggtgggtgaaggcgagcaggagtgggtggctaccttc
tctgaagctgaagggcgcttgttgaaggctggccagaagatccggtttgaatccgaaggc
actgccggcgaggcccaggtgaccgcgttatctcccggtggcgacgccttcagccacaag
ggcaccctacgcgcccgggtgctgaagcccaaggacctgcgccagggcgccttcggccgc
cttctgctgtctggcgccaaatcagaagacctgatggtgccccgcagcgccctggtgctg
cgcggcgaactcaccggcgtgttcctggccaaggaagggcggacagagttgcgctggatc
accctcggcgaaggaagtggcaacagcctgcctgtgcgttcggggctgaaggccgaagac
cgcgtgattgatcggccgggaagtctccaggatggccaacccatcgacatcaagcaaggt
ggggtgagccatgtccactga
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