Geothrix sp. PMB-07: Q9293_04450
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Entry
Q9293_04450 CDS
T09655
Name
(GenBank) glycyl radical protein
KO
K23121
trans-4-hydroxy-L-proline dehydratase [EC:
4.2.1.172
]
Organism
gep
Geothrix sp. PMB-07
Pathway
gep00330
Arginine and proline metabolism
gep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Q9293_04450
Enzymes [BR:
gep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.172 trans-4-hydroxy-L-proline dehydratase
Q9293_04450
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Gene cluster
GFIT
Motif
Pfam:
PFL-like
Gly_radical
Motif
Other DBs
NCBI-ProteinID:
WLT32583
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Position
1026164..1028530
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AA seq
788 aa
AA seq
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MNERTARLRQESLDAVPSLSSERAELITAFYRQNLGKYAIPVMRARAFHHICRFKTVWIG
AGELIVGERGPRPKAVPTYPELTCHTAEDLRILDTRPMTRYRVAPEMIEVYEQEIIPYWQ
GRSLRDQLFEALPAEWHAAYEAGAFTEFMEQRAPGHTVLDDKIYGKGLRDFQADIACSLA
LLDFEKDPEAQDKRAQLEAMAISCDALILLAERHADEAEHLAAQEADPLRAGELRRIAQV
CRRVPAQAPRDFQEALQYYWFCHQGVITELNGWDAFSPGHLDQHLWPFYQQGLREGSLTK
EAARELLECFFVKFNNHTSPSKVGVTAAESGTYTDFANLNLGGLRPDGSDGSNELTDLLL
DIIDEMHLLQPSSNMQVSRKTPDATLKHALRVIRNGYGFPSLFNADAVVEEQLRQGKTLE
DARAGGCSGCVEVGAFGKEAYILTGYFNLSKMLELALHNGFDPRLGRQLGPQTGEATTFQ
SFEDLLRAFETQTRHFLDIKIRGNQIIERLYATRMPAPFLSVLTDDCIKAGKDYNAGGAR
YNNTFIQAVGIGSVTDSLAALQQVVFERGDLALPQLVAVLDRDFSGDEVLRQRLLNKTPK
YGNDDDAADEVMVRVFRFLFQAIDGRPNGKGGAYRLEMLPTTCHVYFGQVCQASADGRRA
GEPLSEGISPVQGADRQGPTAVLRSAAKMDHVKTGGTLLNMKFTPGLLEGEGGIDRLHHL
VRSYFKMDGHHIQFNVVTAAKLREAQADPEAHRGLIVRVAGYSDYFCDLSLALQEEIIRR
TEHEAFSQ
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacgcaccgcacggctccgccaggaaagcctcgacgccgttccctccctcagc
tccgagcgagctgagctgatcaccgccttctaccggcaaaacctggggaaatacgccatt
cccgtgatgcgggcgcgggccttccaccacatctgccgcttcaagaccgtgtggatcggc
gcgggcgagctcatcgtgggcgagcgcggaccccgccccaaggccgtgcccacctatcct
gagctcacctgccacacggcggaggatctgcgcatcctcgacacgcgccccatgacccgc
taccgcgtggcgccggagatgatcgaggtctacgagcaggagatcatcccctactggcag
ggacggagcctgcgggaccagctcttcgaggcgctgcccgcggagtggcacgcggcctac
gaggcgggagccttcaccgaattcatggaacagcgggcgcccggccacacggtgctggac
gacaagatctacggcaagggcctgcgcgatttccaggcggacatcgcctgctcgctggcg
ctgctggatttcgagaaggacccggaagcccaggacaagcgggcccagctggaggccatg
gccatctcctgcgatgccttgatcctcctcgcagagcgccatgccgacgaggccgaacac
ctggccgcgcaggaggccgacccccttcgcgccggggaactgcggcgcatcgcccaggtc
tgccgccgcgtgccggcccaggcgccccgagacttccaggaggccctgcagtactactgg
ttctgtcaccagggtgtgatcaccgagctgaacggctgggatgccttcagccccggccac
ctggaccagcacctctggcccttctaccagcaggggctccgcgagggcagcctcacgaag
gaggcggcgcgggagctgctggagtgcttcttcgtgaagttcaacaaccacacctcgccc
tccaaggtcggcgtgaccgctgccgagagcggtacctacacggacttcgccaacctcaac
ctgggcggcctccgccccgacggcagcgacggcagcaacgagctgacggacctgctgctg
gacatcatcgacgagatgcacctgctgcagcccagcagcaacatgcaggtctcgcgcaag
acgccggatgccaccctcaagcacgccctgcgggtgatccgcaacggctatggtttcccc
tcgctcttcaacgccgatgccgtggtggaggagcagctgcgccagggcaagaccctggag
gatgcccgcgccgggggctgctcaggctgcgtggaggtgggcgccttcggcaaggaggcc
tacatcctcacgggctacttcaacctctccaagatgctggagctagccctgcacaacggc
ttcgatccccgcctgggccgccagctgggcccgcagacgggcgaggccacgaccttccag
agcttcgaggacctgcttcgggccttcgaaacacagacccgccacttcctcgacatcaag
atccgcggcaaccagatcatcgagcggctctacgccacccgcatgcccgcgcccttcctc
tcggtgctcacggatgactgcatcaaggcgggcaaggactacaacgcgggcggcgcccgc
tacaacaacaccttcatccaggccgtgggcatcggcagcgtcacggatagtctggcggcc
ctccagcaggtggtcttcgagcggggcgacctggctctgccgcagctggtggcggttctg
gatcgcgacttctccggcgacgaggtgctgcgtcagcgcctgctgaacaagacgcccaag
tacggcaacgatgacgatgctgcggatgaggtgatggtccgcgtcttccgcttcctcttc
caggccatcgacggtcgacccaacggcaagggtggcgcctaccggctggagatgctgccc
accacctgccacgtctatttcggccaggtgtgccaggcctcggcggatggccgccgcgcc
ggtgagccgctctccgagggcatttcgcccgtgcagggcgccgatcgtcagggccccacg
gccgtgctgcgctccgcggcgaagatggaccacgtgaagaccggcggcaccctgctcaac
atgaagttcacgccgggcctgctggaaggcgagggcggcatcgaccgcctgcaccacctg
gtgcgcagctacttcaagatggacggccaccacatccagttcaacgtggtcaccgccgcc
aagctgcgggaggcccaggccgatcccgaggcgcaccggggcctcatcgtgcgggtggca
ggctactccgactacttctgcgatctgtccttggccctgcaggaggagatcatccgccgc
actgaacacgaggccttctcgcagtga
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