Geothrix sp. PMB-07: Q9293_10235
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Entry
Q9293_10235 CDS
T09655
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
gep
Geothrix sp. PMB-07
Pathway
gep00540
Lipopolysaccharide biosynthesis
gep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Q9293_10235 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gep01005
]
Q9293_10235 (lpxC)
Enzymes [BR:
gep01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
Q9293_10235 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
gep01005
]
Lipid A
Q9293_10235 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Yop-YscD_ppl_2nd
Motif
Other DBs
NCBI-ProteinID:
WLT30094
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Position
2301718..2302638
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AA seq
306 aa
AA seq
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MPRSTTPQTLSREITISGHGLHGNRPCTVRLVPVSKASGLVFVHTPTGTEIPAKADLAGD
LVLSTTLVKDGVRLQTIEHLLSALTGLEVEHLRIEVDAEELPILDGSAAPWVDAILQAGV
KGLEGRRRFMKITQPVEVRNGDRWIRALPFDGLRLRYVIDFPIPALGRQSRELSLTPEKY
RRELGAARTFCLAQEIDMMRARGLALGGSLDNAVVFGADGPLNESLRFEDEAVRHKMLDL
VGDLALLGAPLLGLVEAHAAGHAMHVALAQAILANPSHWEWTEDAEPANVRFFFQPSELS
IAAQPA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcagcaccacgccccagaccctgagccgcgagatcaccatctcgggtcacggt
ctgcacggcaaccggccctgcacggtccggctggtgcccgtatccaaggcttcaggcttg
gtcttcgtgcacacccccacgggaactgaaatccccgccaaggccgacctcgcgggtgat
ctggtactgtccaccactctggtgaaggatggtgtccgcctccagaccatcgagcatctc
ctttccgccctcaccggcctggaagttgagcacctccgcatcgaagtggatgccgaggaa
ctgcccatcctcgatggcagcgccgccccctgggtggacgccatcctgcaggcaggcgtg
aaggggctggaaggccgccgccgcttcatgaagatcacccagcccgtggaagtgcggaac
ggtgaccgctggatccgcgccctgcccttcgacggcctgcgtctccgctacgtcatcgat
ttccccattcccgccctgggccgccagagccgtgagctgagcctcacccccgagaagtac
cgccgggagctgggtgccgcccgcaccttctgcctggcccaggaaatcgacatgatgcgc
gcccggggtctggccctcggcggcagcctggacaacgcggtggtcttcggtgccgatggc
cctctgaacgaatccctccgctttgaagacgaagccgtgcgccacaaaatgctcgacctg
gtgggcgacctggccctgctgggcgcgccgctgctgggtctggtcgaggctcacgccgct
ggccatgccatgcacgtggccctggcccaggccatcctggccaaccccagccactgggag
tggaccgaggacgccgagcccgccaacgtgcggttcttcttccagccttctgagctcagc
atcgccgcccaaccggcctga
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