Geothrix sp. PMB-07: Q9293_10760
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Entry
Q9293_10760 CDS
T09655
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gep
Geothrix sp. PMB-07
Pathway
gep00300
Lysine biosynthesis
gep00550
Peptidoglycan biosynthesis
gep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Q9293_10760
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Q9293_10760
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gep01011
]
Q9293_10760
Enzymes [BR:
gep01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Q9293_10760
Peptidoglycan biosynthesis and degradation proteins [BR:
gep01011
]
Precursor biosynthesis
Amino acid ligase
Q9293_10760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WLT30198
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Position
complement(2421299..2422756)
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AA seq
485 aa
AA seq
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MNLDTLIDGIATRQSGPDVEVVDLSSDSRDIRQGWAFLALKGEKADGAAFVPQALALGAS
AVLSEAPVEVPDTVAACTFLADPRLRMAEMARRLHGTPDEHLALIGVTGTNGKTTTTTLI
RQLLRGAGIGCGLVGTVLNAAGDQEEEAVRTTPESPAFYRWLRRSVEAGDAASAVEVSSH
ALCLGRVHGALFKVGVFTNLTQDHLDYHGTLEAYFQAKASLRNQCGRFLVNADDAYGRRL
LEGGRCWSYAIDHEADYRATELELGPTGTCFRLQGLQGDFRVESPLLGRFNAYNLLAALA
ACAEAGFDLNQLLPAVAHLTGAPGRLERVDCGQPFGVMVDYAHTPDALEKLLAEGRRLLP
PGARLHVLFGCGGDRDRAKRPLMAAAVAAGADVLWHTSDNPRSEDPERILDDAAPGIPEA
LRNDASRYHRHADRRATVAQALADCRPGDLLLLAGKGHEPYQEIHGVKHPYSDRAAVEAA
LGSSQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaacctcgacaccctcatcgatggcatcgccacgcggcagtccgggccggatgtggag
gtggtggatctcagcagcgacagccgcgacatccggcagggctgggccttcctggccctc
aagggcgaaaaggcggatggtgcggccttcgtgccccaggcgctggccttgggcgccagc
gcggtgctgagcgaagctcctgtggaggtgcccgataccgtggccgcctgcaccttcctg
gccgacccccgattgcgcatggcagagatggcccgtcggctgcacggcacgcccgatgag
catttggcgctcatcggcgtgacgggcaccaatggcaagaccaccaccactaccctcatc
cgccagctcctgcggggcgcaggcatcggctgcgggctggtgggcacggtgctcaacgcc
gcgggcgatcaggaagaggaggccgtccgcaccacgccggaaagcccggccttctaccgc
tggctgcggcgcagcgtggaagcaggcgatgcggcctcggcggtggaggtgagcagccat
gcgctgtgtcttggtcgagtccacggcgccctgttcaaagtgggggtgttcaccaacctc
acccaggatcatctggactaccacggcactctggaggcctatttccaggccaaggcgagc
ttgaggaaccaatgcggccgctttctggtgaacgccgatgacgcctatggccgccgtctg
ctggaaggcggacgctgctggagctacgccatcgatcacgaggcggattaccgtgccacg
gaattggaactgggccccacgggcacctgcttccgcctgcaggggctgcagggcgatttc
cgggtggagagcccgctgctgggccgcttcaatgcctacaacctgctggctgccctcgcg
gcctgcgcggaggcgggtttcgacctgaaccagttgttgcctgcagttgcccacctgacg
ggcgccccaggccgcctcgagcgcgtggattgtggccagcctttcggagtcatggtggat
tacgcccacacgccggatgccctggaaaagctgctggccgaggggcggcgactgctgccc
ccgggcgcgcgtctgcacgtgctcttcggctgcggtggcgaccgggaccgcgccaagcgc
cccctcatggcggccgcggtcgccgcgggggcggacgtgctttggcacaccagcgacaat
ccccgcagcgaagaccctgaacgcatcctggatgacgccgcgccgggcattcccgaggcc
ctccgcaacgacgcttcccgctaccaccgccacgccgatcggcgggccaccgtggcccag
gccctggcggactgccgccccggcgacctgctgctgctggcggggaaggggcatgaaccc
taccaggaaatccacggcgtgaagcatccctacagcgatcgcgccgcggtggaagccgcc
ctgggaagctcgcagtga
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