Geothrix sp. PMB-07: Q9293_12460
Help
Entry
Q9293_12460 CDS
T09655
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gep
Geothrix sp. PMB-07
Pathway
gep01501
beta-Lactam resistance
gep01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gep00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Q9293_12460
01503 Cationic antimicrobial peptide (CAMP) resistance
Q9293_12460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gep03036
]
Q9293_12460
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gep02000
]
Q9293_12460
01504 Antimicrobial resistance genes [BR:
gep01504
]
Q9293_12460
Chromosome and associated proteins [BR:
gep03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Q9293_12460
Transporters [BR:
gep02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Q9293_12460
Antimicrobial resistance genes [BR:
gep01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Q9293_12460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
DUF5315
CSD2
Motif
Other DBs
NCBI-ProteinID:
WLT30528
LinkDB
All DBs
Position
2825674..2826768
Genome browser
AA seq
364 aa
AA seq
DB search
MKAIGVLLPITLIFLSGCGKTDSTAPAPVPVQVRQPAVTNQPDSVNVSGSLLPENGLVMV
SFLVPGRVLSVAHREGDFVRKGAVLAVLDSISLKAAADAAAAQAAAAQVAADRADDEWHR
MQQLYESSSLAPNDYQKFKAGREATQEQLRQAQAAQAAARKNLTETTLVAPVDGYISRRL
IEPGAMAGAGQPVFELGALDRLEVSVGVPEADIPQVRVGQKALVRIPTLPGRSFEGVTKV
VGVSADPGTRTYLVRVGVPNPEHVLRLGMVAEVSILGDKAREVVTIPVEAVVRDTRGVTQ
VYQYFPDKKRVFARRVELGATSGTEVTVKSGLAKSDWLVTAGQERLWEGAAVEPATTPAA
AGRR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccatcggcgttttgctccccatcaccctgatattcctgtccgggtgcggaaaa
accgactccaccgcaccggcgccagtccccgtccaggtgcggcaaccggcggtgacgaac
caacccgacagtgtgaatgtgagcggttccctgctgcccgagaacggcctggtgatggtt
tccttcctggtgcccggccgggtgctcagtgtggcccaccgggaaggcgatttcgtgcgc
aagggcgcggtcctggccgtgctggattccatctcgctcaaggccgcggccgatgccgcg
gcggcccaggcggcggcggcccaggtggccgcggaccgggccgacgatgagtggcaccgc
atgcagcagctctacgaatccagcagcctggcgcccaacgactaccagaagttcaaggcg
ggccgcgaggccacgcaggagcagctgcgccaggcccaggccgcgcaggccgccgcccgc
aagaacctgaccgagaccaccctggtggcgcctgtggacggctacatctcccgccggctc
atcgaacccggagccatggccggcgcgggccagcccgtcttcgagctgggcgccctggat
cgcctcgaggtctccgtgggggtgccggaggccgacatcccccaggtgcgcgtgggacaa
aaggcgctcgtccgcattcccaccctgcccggccgctcctttgaaggcgtgacgaaggtg
gtgggcgtctccgccgatcccggcacccgcacctacctggtgcgcgtgggcgtgccgaac
cccgagcacgtgctgcgcctgggcatggtggctgaggtgagcatcctgggggacaaggcc
cgcgaagtggtcaccattcccgtggaggccgtggtccgcgacacccgcggcgtcacccag
gtctaccagtacttccccgacaagaagcgtgtcttcgcccggcgcgtggagctgggggcc
acctccggcaccgaggtgaccgtcaagtccggtctggccaagagtgactggctggtgacc
gcgggccaggagcgcctgtgggagggcgccgccgtggaaccagccaccacgcctgctgct
gccggccggaggtag
DBGET
integrated database retrieval system
