Geomonas oryzisoli: KP004_02815
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Entry
KP004_02815 CDS
T07282
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00020
Citrate cycle (TCA cycle)
ger00785
Lipoic acid metabolism
ger01100
Metabolic pathways
ger01110
Biosynthesis of secondary metabolites
ger01120
Microbial metabolism in diverse environments
ger01200
Carbon metabolism
ger01210
2-Oxocarboxylic acid metabolism
Module
ger_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ger_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KP004_02815
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
KP004_02815
Enzymes [BR:
ger01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
KP004_02815
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
E1_dh
OxoGdeHyase_C
2-oxogl_dehyd_N
EccD
Motif
Other DBs
NCBI-ProteinID:
QWV94139
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Position
641168..643855
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AA seq
895 aa
AA seq
DB search
MGILENLTPQWIESQYQLWKQDPQQLSEEWRAFFTGFELAEGRPAGAEAPTGDEALKQSA
VQSLIYRYRDIGHLLACTDPLSPCQIEHPLLSLSAFGLEPADLDTTFVTRRFMRRSATLK
EILQVLRSTYCGSVGVEFMHLQDPDERQWLIDRMEPGGNRGFLTPEQRLLLLQKLKEAAL
FERELHKRFPGQTRFSLEGGDVLIPLLDAAVTKAASLGVTDVVFGMPHRGRLNVLCNIFG
MPYENMFAEFADNAEYGVVGEGDVKYHKGFSVDLPVEGGGSVHLTLTSNPSHLEAIDPVV
QGKCRARQDRIGEEGETRVLPLLIHGDAAFSGQGVVAETLNLSQLAGYRTGGTLHIVVNN
QIGFTTSAADARSSHYATDVAKMVQAPVFHVYGDDAEAVVHVTELAVAYRDRYRKDVVVE
VICYRRHGHNEGDEPYFTQPLMYQQIKLRPQLHTLYEMELLGEGFQEEDLKAIENEVVQR
LAQAGERQAAPVESAFLARWSGMKPGVAKVAVPTAVAADTLQELSERLARLPEGFHPHPK
VAAVLQKRRDAVIKGGPLDWGNVETLAYASLLSSGVSVRLSGQDVRRGTFSHRHSSLFDQ
ETGENYLPLCSVLDKGAHFCAFDSMLAEFSVLGFEYGYSLEAPDALTIWEAQYGDFANGA
QVIIDQFLVSGEAKWERSSGLVLMLPHGYEGQGAEHSSARIERFLELAAAGNIQVVYPTT
PAQLFHVLRRQMLQPFRKPLVLFTPKSLLRHPDCVSRLEELSSGSFREVIAEPAVGESVR
QVLICSGKIYYDLLGRIRKDQLQGHALLRIEQLYPLPVEQLRDELQRYPSGARFTWVQEE
PRNMGAWRFIHEPLTELLGTVPRYVGRPDAAAPASGSHRLDRVEQERIVDEAVKI
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgggcatattagaaaacctgaccccccagtggatcgagagccagtaccagttgtggaaa
caggacccgcagcagctctccgaggagtggcgcgctttcttcaccggcttcgaactggcc
gaggggcgtcccgccggcgccgaggcccccacgggggatgaggcgctcaagcagtccgca
gtacaatcactcatttaccgttaccgggacatcggccacctgctggcctgtaccgacccc
ctttccccctgccagatcgagcatcccctgctctccctttccgccttcgggctggagcct
gccgacctcgacacgaccttcgtcaccaggcgcttcatgcgacgcagcgcgaccctgaag
gagatcctgcaggtgctgcgcagcacctactgcggctcggtcggcgtcgaattcatgcac
ctgcaggacccggacgagcgccagtggctcatcgaccgcatggagccgggagggaaccgc
ggcttcttaaccccggagcagcggctcttactgctccagaaactcaaggaagccgccctg
ttcgagcgggagctgcacaagaggttcccggggcagaccaggttctccctggaggggggc
gacgtcctcattccgctgctcgatgccgccgtcaccaaggccgcctcgctcggcgtcacc
gacgtcgtgttcgggatgccgcaccgcggccgcctgaacgtcctctgcaacatcttcggc
atgccctacgagaacatgttcgccgagttcgcggataacgccgagtacggcgtggtaggc
gagggggacgtcaagtaccacaagggattctcggtcgacctccccgttgaagggggcggt
tccgtgcatctcaccctcacctcgaacccgagccacctggaagcgatcgacccggtggtg
caggggaaatgccgcgcccgtcaggaccgcatcggcgaggaaggggagacccgtgtgctg
ccgcttttgatccacggcgatgccgccttctccggtcagggtgtggttgccgagacgctg
aacctgtcgcaactggccggataccggaccggaggcaccctccacatcgtcgtcaacaac
cagatcggcttcaccaccagcgccgccgatgcccgctccagccactacgccaccgacgtg
gccaagatggtccaggccccggtgttccacgtctacggcgacgacgccgaggcggtggtg
cacgtcaccgaactggcggtcgcctaccgcgatcgctaccgcaaggacgtggtggtcgag
gtgatctgctaccgcaggcacgggcacaacgaaggagacgagccctacttcacccagccg
ctcatgtaccagcagatcaagctccgtccgcagctgcacaccctctacgaaatggagctc
ctcggagaaggtttccaagaggaggacctgaaggcgatcgagaacgaggtggtgcagcgt
ctggcgcaggcgggcgagcggcaggccgcgccggtcgagtcggcgtttctggcccgctgg
agcgggatgaaaccgggcgtcgccaaggtcgccgtccccaccgcggttgccgccgacacc
ctccaggagctctccgagcgactggcccgtctccccgaggggttccacccgcatcctaaa
gtcgccgccgtgctgcagaaacgacgcgacgccgtcatcaaggggggaccgctggactgg
ggcaacgtggaaaccctcgcctatgcctcgctcctctcctcgggcgtttccgtccggttg
tccggacaggacgtccgtcgcggcaccttcagccaccgtcactcctcgctgttcgaccag
gagaccggcgagaattacctgccgctttgcagtgttttggacaagggggcgcacttctgc
gcctttgacagcatgctggccgaattctccgtgctcggtttcgagtacggttattcgctg
gaggcccccgacgcactcaccatctgggaggcgcagtacggcgatttcgccaacggcgcc
caggtcatcatcgaccagttcctggtcagcggcgaggcgaagtgggagcgctccagcggg
ttggtgctgatgctgccgcacggctacgaggggcagggggcggaacactccagcgcccgg
atcgagcgtttccttgagcttgctgcggcggggaacatccaggtggtttatcccaccacg
ccggcgcagctctttcacgtgctgcgtcgtcagatgctgcaacccttccgaaaaccgctg
gtcctgttcaccccgaagagcctgttgcgtcatccggactgcgtgtcgcggctggaggag
ttgagttccggcagtttccgcgaggtgatcgccgagcccgccgtgggagagtcggtgcgt
caggtgctcatctgcagcggcaagatctactacgacctcttggggcgcatcaggaaggac
cagttgcaggggcatgcgctgctgcggatcgagcagctctatccgcttcccgtcgagcag
ttgcgtgacgaactgcagcgttatccctccggcgcccggttcacctgggtgcaggaggag
ccgcgcaacatgggagcgtggcgtttcattcacgagcccctcaccgagcttttggggacc
gtgccgaggtacgtaggtcgtcccgatgccgcggcacccgcctcaggctcgcatcgcctg
gaccgcgtcgagcaggagcggatcgtggacgaagctgtgaagatctga
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