Geomonas oryzisoli: KP004_03725
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Entry
KP004_03725 CDS
T07282
Symbol
shc
Name
(GenBank) squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
ger
Geomonas oryzisoli
Pathway
ger00909
Sesquiterpenoid and triterpenoid biosynthesis
ger01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
KP004_03725 (shc)
Enzymes [BR:
ger01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
KP004_03725 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
KP004_03725 (shc)
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
TED_complement
Motif
Other DBs
NCBI-ProteinID:
QWV94305
UniProt:
A0ABX8JFK4
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Position
complement(841237..843279)
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AA seq
680 aa
AA seq
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MTSPFKHPISHALTSFNGMVSEPELNVEHKAGATVHQFPPALWKSKPGKAKSPLDVAIEG
SRDFFFREQLPKGYWWAELESNVTITAEYIMLHHFLGLVDHERQRKMSNYLLSKQTEEGF
WTIYYGGPGDLSTTIEAYFALKLAGYPAEHPALEKARAFILSKGGVIKSRVFTKIFLALF
GEFDWLGVPSMPVELNLLPNWTYINIYEFSSWARATIIPLSIVMYKRPVHKLPPAQRVQE
LFVRPPRAIDYTFTKEEGIFTWKNFFIGLDHMLKVYERSPIRPFRKRAMAKAEEWVLEHE
EESGDWGGIQPAMLNAVLALSVLGYDNEHPAVAQGLKALEHFCIETDEQLVLQSCVSPVW
DTALALKALVDAGVPSDHPSLVKGAQWLLEREVRRPGDWKIKSPELEPGGWAFEFLNDWY
PDVDDSGFVMIALKGIEVKDRRAMNEAVKRGINWCLGMQSKNGGWGAFDKDNTKHILNKI
PFADLEALIDPPTADLTGRMLELMGTFGYAKTYPAAQRALEFLKKNQEPEGPWWGRWGVN
YLYGTWSVLCGLAAIGEDMQQPYIKKAVNWIKSRQNIDGGWGETCESYHDATLAGMGEST
ASQTGWALLGLMAAGEADSSTVVRGIQYLISTQRQDGTWDETQYTGTGFPKYFMIKYHIY
RNCFPLMALGTYRTLTGGLE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcccccttcaaacaccccatatcacatgcactcacctcattcaacggcatggtt
agtgagccggagctgaacgtcgaacacaaggcaggggcaactgttcaccagttcccccct
gctctttggaagagtaagccgggcaaggcaaaaagccccctcgatgtcgccattgaaggt
agtcgcgatttcttcttccgcgaacagctccccaaaggttattggtgggccgagctggaa
tccaatgtcaccataaccgcagaatatataatgctgcatcacttccttgggctggtcgat
cacgagcgccagcgcaagatgagcaactacctcctctccaagcagaccgaggaaggattc
tggaccatctattacggcggcccgggcgacctttccaccaccatcgaagcctacttcgcc
ttgaagctcgccggctatcccgccgagcacccggcgctcgagaaagcgcgggccttcatc
ctctccaaggggggcgtgatcaagtcgcgggtcttcacgaagatcttcctggcgctcttc
ggggagttcgactggctcggcgtgcccagcatgccggtggagctcaacctgcttccgaac
tggacctacatcaacatctacgagttctccagctgggccagggccaccatcatcccgctc
tccatcgtgatgtacaagcggccggtgcacaaactcccccccgcgcagagggtgcaggaa
cttttcgtgcggccgccgcgcgccatcgactacaccttcaccaaggaagaagggatcttc
acctggaagaacttcttcatcggcctggaccacatgctcaaggtctacgagagaagcccg
atccgccccttccggaagcgggccatggccaaggcggaggagtgggtgctggagcacgag
gaggagtccggtgactggggcggcatccagcccgccatgctgaacgcggtcctggcgctg
agcgttttgggctacgacaacgagcacccggcggtggcccagggcctgaaggcgctggaa
cacttctgcatcgagaccgacgagcagctcgtgctgcagtcctgcgtctcgccggtgtgg
gacacggcactggccctcaaggcgctggtcgacgccggggtcccctccgaccatccctcc
ctggtcaagggagcccagtggctcctggagcgcgaggtgagaaggcccggggactggaag
atcaagtcgcccgagctcgagccgggagggtgggctttcgagttcctgaacgactggtac
cccgacgtcgacgactccggcttcgtcatgatcgccctgaaagggatcgaggtgaaggac
cgcagggcgatgaacgaagcggtgaaaaggggcatcaactggtgcctggggatgcagagc
aaaaacggcggctggggcgccttcgacaaggacaacaccaagcacatcctgaacaagatc
ccgttcgccgaccttgaggcgctcatcgacccccccaccgccgacctcaccggccggatg
ctggagctcatggggaccttcggctacgccaagacctacccggcggcgcagcgcgccctg
gagttcctgaagaagaaccaggagccggaagggccgtggtggggacgctggggggtgaac
tacctctacggcacctggagcgtgctctgcgggcttgccgccatcggcgaggacatgcag
cagccctacatcaagaaggcggtcaactggatcaagtcgcgccagaacatcgacggcggc
tggggcgagacctgcgagtcctaccacgacgccaccctggccggcatgggggagagcacc
gcgtcgcaaaccggctgggcgctgttgggcctcatggcggccggcgaggcggattcctcc
acggtggtgcgcggcatccagtacctgatctccacccagagacaggacgggacctgggac
gagacccagtacacggggaccggcttccccaagtacttcatgatcaagtaccacatctac
cgcaactgtttcccgctcatggcgctgggtacctatcgcaccctcaccggcggcctggag
taa
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