Geomonas oryzisoli: KP004_06055
Help
Entry
KP004_06055 CDS
T07282
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ger
Geomonas oryzisoli
Pathway
ger01501
beta-Lactam resistance
ger01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KP004_06055
01503 Cationic antimicrobial peptide (CAMP) resistance
KP004_06055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ger03036
]
KP004_06055
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ger02000
]
KP004_06055
01504 Antimicrobial resistance genes [BR:
ger01504
]
KP004_06055
Chromosome and associated proteins [BR:
ger03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KP004_06055
Transporters [BR:
ger02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KP004_06055
Antimicrobial resistance genes [BR:
ger01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KP004_06055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
DUF2564
Motif
Other DBs
NCBI-ProteinID:
QWV94738
LinkDB
All DBs
Position
1362944..1364170
Genome browser
AA seq
408 aa
AA seq
DB search
MKGRFETAVKAVCLSAVGIALAACSGEQHNKEAKGDAVPVVVGRVQKVQEREIISVSGTV
ATPNAPATLSFLVSGKVVFVGPREGEFVKKGQVLARIDPTDFNLSVKGAAAQLASSQAAL
EKATNSARPEHLEQARIAFERAEDEYRRMKMLYDSKSLAPNDFQKYKAACEHAKQEYDQA
KAGGQKEDKALAKAGYHEAAAHLDVAKKALGDATLYAPMDGYIAKRAVEPGDTAAAGRPV
FEMVRMDPIEVSVGVPETDVHLVSVGQKADITVPALPGKSFQGTVRVINVSADTNTRTYM
TRISVPNPEHALRVGMVSEATIRGDRTVSMVTLPGDAVVRDPQGATQVYVYYPDQKRVYT
KRVEIGAAVNKDIEIKGGLDGNELVVLAGQTKLRNGAIVSATEQASRK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtagattcgagacggcagtgaaggccgtttgcctgtcggcagtgggaattgcg
ctggcggcatgtagtggcgagcaacacaacaaggaagctaaaggggatgcggtgccggtg
gtggtggggcgggtccagaaggtccaggagcgcgagattatttcggtgagcgggaccgtc
gccacacccaatgcaccggcgaccctctccttcctggtgtccggaaaggtggtgttcgtg
gggccgcgggagggtgagttcgtcaagaagggacaggtcctagcgaggatcgatcccacc
gatttcaacctctccgtcaaaggggccgccgcccaactggccagcagccaagccgcgctg
gaaaaggcgacgaattcggcgcgccccgagcacctggagcaggcgcgcatcgcctttgag
cgggccgaggacgagtaccggcgcatgaagatgctctacgactcgaagagcctggcgccc
aacgatttccagaagtacaaggccgcctgcgaacacgccaaacaggagtatgaccaggcc
aaggccggcgggcagaaggaggacaaggcgctggcgaaggcaggataccacgaggcggcg
gcccatctcgacgtggccaaaaaggcgctcggcgatgcgacgctgtacgcacccatggac
gggtacatcgccaaacgtgccgtggagccgggcgataccgccgcggccgggcgtcccgtt
ttcgagatggtgcgcatggacccgatcgaggtgagcgtgggcgtgccggaaaccgacgtg
cacctggtgagcgttggccagaaggctgacatcactgtaccggccctgcccggtaagtcc
ttccaagggacggtgcgtgtcatcaacgtttccgccgacaccaatacccgcacctacatg
accaggatcagcgtccccaatccggaacatgccctcagggtggggatggtgtcggaggcg
accattcgcggcgaccggacggtgtccatggtgacgctcccgggagacgcggtggtgcgc
gacccgcagggcgcgactcaggtgtacgtctactatccggaccagaagcgcgtctacacc
aagcgggtggagatcggcgcggcggtcaacaaggatatcgagatcaagggcgggctggac
ggcaacgagctcgtcgtcctggccggacagacgaagctgagaaacggcgcgattgtgtcg
gcaacggaacaggcaagccggaagtag
DBGET
integrated database retrieval system
