Geomonas oryzisoli: KP004_10805
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Entry
KP004_10805 CDS
T07282
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ger
Geomonas oryzisoli
Pathway
ger01501
beta-Lactam resistance
ger01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ger00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KP004_10805
01503 Cationic antimicrobial peptide (CAMP) resistance
KP004_10805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ger03036
]
KP004_10805
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ger02000
]
KP004_10805
01504 Antimicrobial resistance genes [BR:
ger01504
]
KP004_10805
Chromosome and associated proteins [BR:
ger03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
KP004_10805
Transporters [BR:
ger02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
KP004_10805
Antimicrobial resistance genes [BR:
ger01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KP004_10805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
BSH_CzcB
Beta-barrel_RND_2
YknX_C
HH_EMRA
HH_AAEA_pHBA
DUF6687
CzcB_C
DRY_EERY
Motif
Other DBs
NCBI-ProteinID:
QWV91724
UniProt:
A0ABX8J2J8
LinkDB
All DBs
Position
complement(2461212..2462489)
Genome browser
AA seq
425 aa
AA seq
DB search
MQIKYRAQLLSVVVVLSGSLLLSGCGKKQQQAGGPPMGPPEVGVIEVKPERVALTTELPG
RTSPYLIAEVRPQVSGIILKRVFTEGSDVKAGQVLYQIDPATYQAAYASAKASEARAEAN
VLPAKLKEERFRELVKINAVSKQDYDAAYAALKQAEADVASAKAAVETARINLAYTKVTA
PISGRIGRSTVTDGALVTASQATALATIQQLSTMYVDVTQSSSDMLKLNRSLATGLLKRD
QAGQARVKLLLEDGTPYPVTGSLKFSDVTVDQSTGSITVRAVFPNPKQTLLPGMFVRAVL
EEGINESAILIPQRGVTRNAAGQAIVMVVGAENKVEPRPIQVARTVGDAWLVSSGLKGGE
KVILEGLQKARPGTQVKVVPFQSPEGQGGPGAGAPAAAGQGGQGAAGAKAAAPGAPAAPA
QPQKK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcaagtacagggcacagttgttatccgtcgttgtagttctgagcggctccctg
cttctttccgggtgcggcaagaaacagcagcaggccggcggtccgccgatgggtccgccc
gaggtgggcgtcatcgaggtgaagcccgagcgcgtcgccctgaccaccgaacttccgggg
cgcacgtccccttacctgatagccgaggtccgtccccaggtgagcggcatcattttgaag
cgggtcttcaccgagggtagcgacgtcaaggccggccaggtgctgtaccagatcgatccc
gcgacctaccaggccgcctacgccagcgccaaggcgagcgaggcgcgcgccgaggccaac
gtcctccccgccaagctgaaggaggagcgcttccgcgaactggtcaagatcaacgcggtc
agcaagcaggattacgacgccgcctacgctgcgctcaaacaggccgaggccgacgtcgcc
tccgcgaaggccgccgtcgagacggcgcggatcaacctggcctacaccaaggtgaccgcc
cccatctccggccgcatcgggcgctccaccgtcaccgacggcgcactcgtgaccgcgagc
caggcaaccgccctggcgaccatccagcagctctccaccatgtatgtggacgtgacccag
tcgagctccgacatgctgaagctgaaccgcagcctcgccaccggtcttttgaagcgcgac
caggccggccaggcccgcgtcaagctcctgctcgaggacggcaccccgtacccggtgacc
ggctcgcttaaattctccgacgtgaccgtcgaccagagcaccggctccatcaccgtgcgc
gccgtcttcccgaacccgaagcagaccctgctcccgggcatgttcgtccgtgcggtactt
gaagaggggatcaacgagtcggcgatcctgatcccgcagcgcggcgtgacccgcaacgcg
gccggccaggccatcgtcatggtggtcggtgccgagaacaaggttgagccgaggccgatc
caggttgcccgcaccgtgggtgacgcctggctggtgagctccggcctgaagggcggcgag
aaggtgatcctggaggggctgcagaaagcgcgtcccggcacccaggtgaaggtggtgccg
ttccagtcccccgaagggcagggcggtcccggcgcgggcgctccggcagcggcagggcag
ggcggtcagggtgccgcaggcgccaaggcggcagcccccggtgccccggcagccccggca
cagcctcagaaaaagtag
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