KEGG   Geomonas oryzisoli: KP004_17670
Entry
KP004_17670       CDS       T07282                                 
Name
(GenBank) homocysteine S-methyltransferase family protein
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
ger  Geomonas oryzisoli
Pathway
ger00270  Cysteine and methionine metabolism
ger00450  Selenocompound metabolism
ger00670  One carbon pool by folate
ger01100  Metabolic pathways
ger01110  Biosynthesis of secondary metabolites
ger01230  Biosynthesis of amino acids
ger04980  Cobalamin transport and metabolism
ger04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:ger00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    KP004_17670
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    KP004_17670
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    KP004_17670
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    KP004_17670
   04980 Cobalamin transport and metabolism
    KP004_17670
Enzymes [BR:ger01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     KP004_17670
SSDB
Motif
Pfam: S-methyl_trans B12-binding Pterin_bind B12-binding_2 CdhD LpxI_N
Other DBs
NCBI-ProteinID: QWV92974
LinkDB
Position
complement(4065674..4068118)
AA seq 814 aa
MKMPFMQAVRERVLVLDGAMGTMLQERGLKAGQSPEEMNLTAPEVVAGVHRAYLEAGADI
IVTNTFGGTKAKLDHYGLGDQVARINAEAVRIAREVAGEDAYVAGSIGPTGRFVEPVGDM
SFDEAHALFTEQAKALIDAGCDVISLETFLDIKEIRAALIAIRELSADIPVIAMLTFEEK
GRSVLGSPPEAAAITLEAAGASIVGSNCGLGVDGIYDILCAMRKVTSLPLISQANAGLPI
LKDGVTVFPGTPDEMTAYHDRMLGLGVRVIGGCCGTTPAHIAAIKEALSGKQTPFTARED
DGTTWISSRGSFAAIGKKHPVALIGERINPTGKKLYSQELREGKVSYIRREALEQTELGA
TLLDVNVGTPGIDEPAAMERAVFCITGAVQTPLVLDSSSPEALEAGLKSADGKVLINSVN
GEEKSLAAVLPLAKKYGAALVCLTLDDAGIPAEAEGRVVVAQKIADLAAAAGIKRSDLVV
DCLTLTVSAEPKGALVALEAVRRVSELGLNSTLGVSNISFGLPCRPLISSTFFSMVMAAG
LTSAIVNVKEAPMMSAWRSAMVLLGKDVNAAGYIDAYRGQAVGATVQPAVAAGSASPAQP
EAAEPEGIRGRLAKAVINGELEAVVPLVEEALAEGLSPMQISSEALLVGLDEVGRRFGNG
SFFLPQVMVSADTMKAAFARLKQELSGGALKSAGKILMATVEGDIHDIGKNILVTLLENN
GFEVIDLGKNVPAAKILDAARSHQVDAVGLSALMTTTMAQMDKVVSLLKSEGVKSFTMVG
GAVVTQQYADEIGADLYAKDAMEAVARIKELLAK
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgaagatgccgtttatgcaggcggtgagagagcgggtgctggttttggacggcgccatg
ggaaccatgctgcaggagcgcgggcttaaggcgggtcagtcgcccgaggagatgaacctg
accgcccctgaggtggtggcgggcgtacaccgcgcctacctggaggcgggcgcggacatc
atcgtcaccaacaccttcggcggcaccaaggcgaagctcgaccactacggcctgggggac
caggtcgcgcggatcaacgccgaggcggtcaggatcgcccgcgaggtggccggcgaggac
gcctacgtggcgggctcgatcggaccgaccggacgcttcgtggagccggtgggcgacatg
agcttcgacgaggcccacgcgctcttcaccgagcaggccaaggccctgatcgacgccggc
tgcgacgtcatctcgctggagaccttcctggacatcaaggagatccgcgcggcgctgatc
gccatccgcgagctttccgccgacatccccgtgatcgcgatgctcaccttcgaggagaag
ggtagaagcgtgctcggctcgccgccggaggccgccgccatcaccctggaggcggcgggc
gcctccatcgtcggctccaactgcggcctcggcgtggacggcatctacgacatcctctgc
gccatgaggaaggtgacctccctgccgctcatctcccaggcgaacgcggggcttcccatc
ctgaaggacggcgtcaccgtcttccccggcacccccgacgagatgaccgcctaccacgac
cgcatgctcggcctgggcgtgcgcgtcatcggcggctgctgcggcaccacaccggcccac
atcgccgccatcaaagaggcgctgtccgggaagcagaccccgttcaccgccagggaggac
gacggcaccacctggatctccagccgcggctccttcgccgccatcggcaagaagcacccg
gtggccctgatcggcgagcgcatcaacccgaccgggaagaagctctattcgcaggaactg
cgcgaggggaaggtgagctacatccggcgcgaggcgctggaacagaccgagctgggcgcg
accctgctcgacgtgaacgtcggcacccccggcatcgacgagcccgccgccatggagcgc
gccgtcttttgcatcaccggcgcggtgcagaccccgctggtgctcgattcctcttcgccc
gaggcgctggaggcggggcttaagtccgccgacggcaaggtgctcatcaactcggtgaac
ggcgaagaaaagagcctcgccgccgtgctgccgctcgccaaaaaatacggggcggccctg
gtctgcctgaccctcgacgacgccggcatcccggccgaggccgaggggagggtggtcgtg
gcacagaagatcgccgacctcgccgccgcggcagggatcaagcgcagcgacctcgtcgtc
gattgcctcaccctcaccgtgagcgcggagccaaaaggtgccctggtcgccctggaggcg
gtgcgccgggtgagcgagcttggtctcaacagcaccctcggcgtctccaacatctccttc
ggtctcccctgtcggccgctcatctcgtccaccttcttctccatggtcatggccgccggt
ctcacctcggccatcgtcaacgtgaaggaggcccccatgatgtccgcctggagaagcgcc
atggtgctgctgggcaaggacgtcaacgcggccggctacatcgacgcctaccgcgggcag
gccgtcggcgccaccgtgcagcccgccgttgccgccggcagcgcttcccccgcccagccg
gaagccgccgagccggaagggatccgcgggcgcctcgccaaggcggtcatcaacggcgag
ctcgaggcggtggtcccgctggtggaggaggccctcgccgaggggctctcgccgatgcag
atcagctcggaggcgctcctggtcggcctggacgaggtggggcggcgtttcggcaacggc
tccttcttcctgccgcaggtgatggtttccgccgataccatgaaggcggccttcgcgcgg
ctgaagcaggagctttccggcggcgccctgaagagcgcgggcaagatcctgatggccacg
gtcgagggcgacatccacgacatcggcaagaacatcctggtaacccttctggaaaacaac
ggtttcgaggtgatcgacctcggcaagaacgtcccggcggccaagatcctcgacgcggcg
cgcagccaccaggtggacgcggtggggctctcggcgctgatgaccaccaccatggcccag
atggacaaggtggtgagccttttgaagtcggaaggggtaaagagcttcaccatggtaggg
ggcgctgtggtcacccagcagtacgccgacgagatcggtgcggacctctacgccaaggac
gccatggaggccgtggcccggatcaaggaactgctggcaaaataa

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