Gemmata sp. SH-PL17: VT84_00920
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Entry
VT84_00920 CDS
T04358
Symbol
kgd
Name
(GenBank) Multifunctional 2-oxoglutarate metabolism enzyme
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00020
Citrate cycle (TCA cycle)
ges00785
Lipoic acid metabolism
ges01100
Metabolic pathways
ges01110
Biosynthesis of secondary metabolites
ges01120
Microbial metabolism in diverse environments
ges01200
Carbon metabolism
ges01210
2-Oxocarboxylic acid metabolism
Module
ges_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ges_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VT84_00920 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VT84_00920 (kgd)
Enzymes [BR:
ges01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
VT84_00920 (kgd)
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GFIT
Motif
Pfam:
Transket_pyr
OxoGdeHyase_C
E1_dh
2-oxogl_dehyd_N
ZnuA
T3SS_needle_E
Motif
Other DBs
NCBI-ProteinID:
AMV22940
UniProt:
A0A142X950
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Position
226300..229191
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AA seq
963 aa
AA seq
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MFSENGEYLEEQFRRWQQDPNSVEPTWQGFFAGMRFAGTLPGAAASPGGAASSADLRVQT
GVVRLVFWYRQAGHLQADIDPLATQPPPPCQLLQLENFGLSDSDLDRVVDGSMYFGLNGP
VKLGDLIDTLRATYCGTTGIEFMHIESQDMRRWIASRVEPTCNRPMLKLRQKYRILNTLH
EAELFEKFLHTKYVGQKRFSLEGGETLIPVLDAITEKGPSVGVKEIVIGMAHRGRLNVLA
NTLHKPFSEIFNEFEDNYLPLSTHDGDGDVKYHLGFSADIETADGGKVHMSVAPNPSHLE
IVGPVVEGRVRAKQRQHGDKERVTGVPVLIHGDAAFAGQGVIMETFNLMNLAGYRTGGTI
HIVVNNQIGFTTNPRDSRSTQYCTDIAKFVQAPIFHVNAEDPEACVAAAELALEFRQQFK
RDVVIDLVCYRRWGHNEGDNPGYTQPLQAKVIAKKPPLSTVYAAQLAGRPDDPSVTPDVV
ADLVREFDDKLAEAMREAETVAAAYRNELEAAHKQVKEMVKKGQTKKRGMEGFSGRWKDF
TNRYSHEPIATGLSDAVLDRIGTALGTFPEGFTVHPNLLKTLQTRGENIKKRGSVDWGTG
EALAFGSLVLEGTPVRLSGQDSRRGTFTQRHSVVVDYETGAEHYPLANLDPKQAPFDVID
SSLSEAAVMGFDFGYSLDAPESLVLWEAQFGDFANGAQVIIDQFITSCESKWNRSSGIVL
LLPHAYEGQGPEHSSARLERFLQMCAEDNIQVAYPTTPSQYFHLLRRQMKRKFRKPLVVM
TPKSLLRLPAAVSPVSEFVTGQHFREVLDDKSNPDQVTRVLVCSGKVYYDLAKKREELGT
QAVAILRIEQLYPWPEQQLSAALGRYRRAREFVWVQEEPQNMGGWTFVEPRLRAMNFPFE
YVGRDAGASPATGSHHVHEREQKLLVDGAFAPTPSGPIGPGWIGWNAVESNGTHGAHTDA
AKA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcgagaacggcgagtacctcgaagagcaattccgccgctggcaacaagatccc
aactccgtcgaaccgacctggcagggtttctttgcggggatgcggttcgccgggacactc
cccggcgccgccgcaagtcccggaggggcagcgagttccgcggacctgcgcgtccaaacc
ggagtggtgcggctcgtgttctggtaccggcaagccgggcaccttcaggccgacatcgac
ccgctcgcgactcaaccacctcccccgtgccaactcctccaactcgaaaacttcggcctt
tcggacagcgacctcgaccgcgtcgttgacgggagcatgtacttcggactgaacggccca
gtgaagctgggcgacctgattgatacgctgcgggccacgtactgtggcaccaccggcatc
gagttcatgcacatcgagtcgcaggacatgcgccgatggatcgcgtcgcgtgtcgagccg
acctgcaaccggccgatgctcaaattgcggcagaagtaccgtattctcaataccttgcac
gaagccgagctgttcgagaagttcctgcacaccaagtacgtcggtcagaaacggttctcg
ctcgaaggtggcgaaacgctcatcccggttctggacgcgatcaccgagaaaggcccgtcg
gtcggcgttaaagaaatcgtcatcgggatggcccaccgcggccggctgaacgttctcgcg
aacacgctccacaagcccttctctgaaatcttcaacgagttcgaggacaactacctcccg
ctgtccacgcacgacggcgacggggacgtgaagtaccacctcgggttctcggcggacatc
gaaaccgccgacggtgggaaggttcacatgtctgtggcgcccaaccccagccacctggag
atcgttgggccggtggtcgagggccgggttcgtgccaaacagcgacagcacggcgataaa
gagcgcgtcaccggcgtaccggtgctcatccacggcgacgcggcgttcgcgggccagggc
gtcatcatggagacgttcaacctgatgaacctcgcggggtatcgcaccggcgggaccatt
catatcgtggtaaacaaccagatcgggttcaccacgaacccgcgcgactcccgcagcacg
caatactgcaccgacatcgcgaagttcgttcaggcgccgatcttccacgtcaacgcggaa
gacccggaggcgtgcgtggcggcggcggaactcgcgctggagttccgccaacagttcaag
cgagacgtggtcatcgacctggtgtgctaccgccggtgggggcacaacgagggcgacaac
ccgggctacacgcagcccctccaggccaaggtgatcgccaagaagccgccgctctccacc
gtctacgccgcccaactcgccgggcgccccgacgacccgagtgtgacacccgacgtcgtc
gcggaccttgttcgcgagttcgacgacaagctcgccgaagcgatgcgcgaggccgaaacg
gtcgccgccgcgtaccgcaacgagttggaagcggcgcacaagcaagtcaaggagatggtg
aagaagggccagaccaaaaagcgcgggatggagggcttctccgggcgctggaaggacttc
accaatcggtactcgcacgaacccattgcgaccggattgagtgacgcggttctggaccgc
atcggaaccgcgctgggcacgttcccggaggggttcacggttcacccgaacctactcaag
acgctccagacgcgcggggagaacatcaagaagcgcgggtccgtggattggggcactggc
gaggcgctcgcgttcggctcactggtgctcgaaggtaccccggtgcgactcagcggccag
gacagccggcgcgggacgtttacgcagcggcactcggtcgtggtcgattacgaaaccggc
gcggagcactacccgctggcgaacctcgacccgaagcaggccccgttcgacgtgatcgac
agttcgctctccgaagcggccgtgatggggttcgatttcgggtactcgctcgatgctccg
gaatcgctggttttgtgggaggcgcagttcggtgacttcgccaacggcgcgcaggtcatc
atcgaccagttcatcacgtcgtgcgaatcgaagtggaaccggtccagcggcatcgtgctc
ctgctcccgcacgcttacgagggccaggggccggagcactcttccgcgcggctcgaacgg
ttcctccagatgtgcgcggaagataacatccaggtcgcgtacccgaccacgccgtcacaa
tacttccacctcctgcgccggcagatgaagcggaagttccgcaagccgctcgtggtgatg
acgccgaagagcctgttgcggctcccggccgcggtgtcgccggtgagcgagtttgtgacc
gggcagcacttccgcgaagtgctcgacgacaaatccaacccggaccaggtgacgcgcgtg
ctggtgtgctccgggaaggtgtactacgacctcgcgaagaagcgcgaggaactcggcacg
caagcggttgcgatcctgcggatcgagcaactgtacccgtggcccgaacaacagctttcc
gccgcgctcggccgctaccgccgtgcccgcgagttcgtgtgggtgcaggaagagccgcaa
aacatgggcgggtggacgttcgtggagccgcgcctgcgggccatgaacttccccttcgag
tacgtcggtcgcgacgccggtgccagccccgcgaccgggtcgcaccacgttcacgagcgc
gaacagaagttgctcgtggacggcgcgttcgcgccgacgccgtcgggtccgatcggaccg
gggtggatcggctggaacgcggtcgagtccaacggcacacacggcgcgcacacggacgcg
gccaaggcataa
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